PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027356086.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 397aa MW: 44812.5 Da PI: 5.9831

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027356086.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.7	4.4e-16	51	110	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n+ k+ ++++lg ++t+e Aa+ ++ a++k++g XP_027356086.1 51 SIYRGVTRHRWTGRFEAHLWDkSSWNNiqnKKgRQVYLGAYDTEEAAARTYDLAALKYWG 110 57*****************777799977447***********************98 PP
2	AP2	52.6	1.1e-16	153	204	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I ++ +k+ +lg++ t eeAa a++ a+ +++g XP_027356086.1 153 SKYRGVARHHHNGRWEARIGRVCG---NKYLYLGTYKTQEEAAMAYDMAAIEYRG 204 89**99*******99644...4***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MKRSPTSSCS SSSSFGFESP IQSEKRRPKH PRRNLKSQKC KQNQVTGRRS SIYRGVTRHR 60 WTGRFEAHLW DKSSWNNIQN KKGRQVYLGA YDTEEAAART YDLAALKYWG KDATLNFPIE 120 TYVKELEEMD KVSKEEYLAS LRRQSSGFSR GISKYRGVAR HHHNGRWEAR IGRVCGNKYL 180 YLGTYKTQEE AAMAYDMAAI EYRGLNAVTN FDISNYIDKI QKKNDQTQHT EPQTEIAPNS 240 SDSEEAEEEQ TTTPPPENLY MQPQQHQAPH THVSPSEESS LVTIMDHVLD QDLPWSFMYT 300 GLSQFQDQDL GLSKGEDLVG MFDGSGFEED IDFLFSTEPG ESDINVSAVL DSIECGVTNV 360 ASGSMVMDNN QNKLLSFAAS SSSPSSTTTT LSCNYSL

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MKRSPTSSCS SSSSFGFESP IQSEKRRPKH PRRNLKSQKC KQNQVTGRRS SIYRGVTRHR  60
WTGRFEAHLW DKSSWNNIQN KKGRQVYLGA YDTEEAAART YDLAALKYWG KDATLNFPIE  120
TYVKELEEMD KVSKEEYLAS LRRQSSGFSR GISKYRGVAR HHHNGRWEAR IGRVCGNKYL  180
YLGTYKTQEE AAMAYDMAAI EYRGLNAVTN FDISNYIDKI QKKNDQTQHT EPQTEIAPNS  240
SDSEEAEEEQ TTTPPPENLY MQPQQHQAPH THVSPSEESS LVTIMDHVLD QDLPWSFMYT  300
GLSQFQDQDL GLSKGEDLVG MFDGSGFEED IDFLFSTEPG ESDINVSAVL DSIECGVTNV  360
ASGSMVMDNN QNKLLSFAAS SSSPSSTTTT LSCNYSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	1e-111	AP2 family protein