PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027352989.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 359aa MW: 40750.3 Da PI: 6.7872

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027352989.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.5	0.0001	282	304	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ XP_027352989.1 282 FMCRKCGKAFAVRGDWRTHEKNC 304 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MADPYSNFFS SSTFFQFHHH FPSSNPSPHT PHSPYVHHNF INHTKSNDTT FLHYHNLHHH 60 HHSNTTTTTT FSSSFPPSPP LREELPLLRL SPAKQEEEEQ EQEDMSCTAV MDMEDRIQLK 120 EEDDDEEHGT VTVALHIGLP SPSAAEMASV LSSSSEITDK EHGDGGEDSS AGFMVNRLNK 180 GQYWIPTPSQ ILIGPTQFSC PVCCKTFNRY NNMQMHMWGH GSQYRKGPES LRGTQPTGML 240 RLPCYCCAPG CRNNIDHPRA KPLKDFRTLQ THYKRKHGIK PFMCRKCGKA FAVRGDWRTH 300 EKNCGKLWYC ICGSDFKHKR SLKDHIKAFG SGHAAYGIDG FEEDDEPASE VEQDNDSTQ

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MADPYSNFFS SSTFFQFHHH FPSSNPSPHT PHSPYVHHNF INHTKSNDTT FLHYHNLHHH  60
HHSNTTTTTT FSSSFPPSPP LREELPLLRL SPAKQEEEEQ EQEDMSCTAV MDMEDRIQLK  120
EEDDDEEHGT VTVALHIGLP SPSAAEMASV LSSSSEITDK EHGDGGEDSS AGFMVNRLNK  180
GQYWIPTPSQ ILIGPTQFSC PVCCKTFNRY NNMQMHMWGH GSQYRKGPES LRGTQPTGML  240
RLPCYCCAPG CRNNIDHPRA KPLKDFRTLQ THYKRKHGIK PFMCRKCGKA FAVRGDWRTH  300
EKNCGKLWYC ICGSDFKHKR SLKDHIKAFG SGHAAYGIDG FEEDDEPASE VEQDNDSTQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-141	C2H2 family protein