PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027352710.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ERF | ||||||||
Protein Properties | Length: 261aa MW: 29503.9 Da PI: 5.8509 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.3 | 1.9e-18 | 56 | 104 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a+++ ++ ++g XP_027352710.1 56 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDREARIIRG 104 9*******.**********954...4*******************99988887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MCGGAIIAEF IPRHRSRHLT ASELWPNTFE ARQQQPPLKP VRDGPAPPKK QRKNLYRGIR 60 QRPWGKWAAE IRDPRKGVRV WLGTFNTAEE AARAYDREAR IIRGKKAKVN FPNEDQYSIK 120 APVIPPPHQN PPFYQQQEYV SKSLNLEFGY DLNQAGPDFA SVDERCGYGS ASGSEGTYST 180 SELLGEETEV KVLGVASEEE KNKVDKLSEE LMAYENYMRF YQIPYYDAQL AAPNNTVQEN 240 VVGDLWNFDA DAEAVTSSSA L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47520.1 | 2e-34 | ERF family protein |