PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027350296.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family B3
Protein Properties Length: 293aa    MW: 32704.7 Da    PI: 9.0639
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027350296.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.71.8e-1717107299
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     fkv+     + s++l +pk+f++ ++g +++  + tl d++ +s +  +  +k  +r v+++GW++F+k++gL+egDf+vF++dg+s+f  +vk+
  XP_027350296.1  17 FKVF--LLKTGSAQLQIPKSFTKFFNGTTPC--KATLVDQDINSRDDIC-LEKVEDRLVFKSGWEQFAKEKGLEEGDFLVFQYDGNSSF--YVKI 104
                     5555..44556788********999999777..6899998888877666.5999999********************************..**** PP

                     E-S CS
              B3  97 frk 99 
                     f+k
  XP_027350296.1 105 FSK 107
                     *98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MESALHSSGD QTLQEFFKVF LLKTGSAQLQ IPKSFTKFFN GTTPCKATLV DQDINSRDDI  60
CLEKVEDRLV FKSGWEQFAK EKGLEEGDFL VFQYDGNSSF YVKIFSKTGC RKVAAPPPPP  120
APACCEKVAV PIVILDEDSN LNSKKNRRGR KRKNLSTTVL KTNENKKPVL EGPSEGAQSK  180
LNGVKEENVN RYEMKPDLAN LDPPWNPHFS ICLTAWKLNR VEIPRLVLKK FNIILTPRIS  240
IRDENDNLWP VAIITTAPAV VIFCPMDGPI SGGATTFTKV NGVIFSLLLT KQT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1147153RRGRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.11e-17B3 family protein