PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027349131.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 448aa MW: 50008.8 Da PI: 6.6915 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.8 | 4.4e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ + ++G g+W+++++ g+ R++k+c++rw +yl XP_027349131.1 14 KGLWSPEEDEKLLKHISKYGHGCWSSVPKQAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 46 | 1.2e-14 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +++eE+ +++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ XP_027349131.1 67 RGTFSQEEENIIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 899*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 448 aa Download sequence |
MGRHSCCYKQ KLRKGLWSPE EDEKLLKHIS KYGHGCWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQEEENIIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG 120 IDPVTHKPLS EVENGEEDKT RSQEKVPELS NELNLLNSES FKSDEASYEH RTSPIAPKGY 180 ATEMEGSSSS KINSKNDPNL ITNCSNKDLF LDRFMTSHQE SYTTSCQPSD LMGNYPLQMS 240 YASSTDTLPT NSNSCHWFSQ TARPFDMNSE FTSNVMSILP PTATSFLNSS SFCYKPSLAV 300 PSEDISISTA SFALNGSNYW EASASNNSNS SNTSDGSREL TSSSPLNVKN SVLSSWGMTD 360 CSTSTKEAQI SLMENQTEEA KWSEYLHNPM LMLAAPESLC NQIKPATHLV PDHALGAMLP 420 HSKEQEQSQT SSIFSKDIQK LTAAFGHI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 112 | 118 | LKKKLRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01680.3 | 7e-96 | MYB family protein |