PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027349040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ERF | ||||||||
Protein Properties | Length: 246aa MW: 27795.4 Da PI: 8.1963 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.5 | 4e-19 | 106 | 156 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y GVr+++ +g+++AeIrd + k +r++lg+f++aeeAa a+++a+ +++g XP_027349040.1 106 SYVGVRRRP-WGKFAAEIRDtT--R-KGRRVWLGTFDSAEEAALAYDQAAFSMRG 156 699******.**********33..2.24*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MKLMLSLLLF HTSQPYQSDI FKAINMNSPL FQHSDWPWGT LKEPSETLSE SFSSKGNDYD 60 PIHDSLSFDM IDYSRDPQPP SDVIERQPKL LLLNSEAKEV KTNKKSYVGV RRRPWGKFAA 120 EIRDTTRKGR RVWLGTFDSA EEAALAYDQA AFSMRGSSAV MNFSVKRVQE SLQEINYVGS 180 RQGCSPALEL KQKHFIRRKL SSKAKKSKGQ QELEESSVVV LEDLGAEYLE ALLSTSDQSA 240 SSSCLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 4e-38 | ERF family protein |