PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027349038.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ERF | ||||||||
Protein Properties | Length: 222aa MW: 24861.1 Da PI: 9.8006 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.6 | 3.2e-18 | 75 | 122 | 2 | 52 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 y+GVr+++ +g+++AeIrdp+ ng r+++g+f+tae Aa a+++a+ XP_027349038.1 75 PYRGVRRRP-WGKFAAEIRDPTRNG--VRVWIGTFDTAEAAALAYDQAAFL 122 59*******.**********98887..*********************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MDFDSSKCSY QSVESFSSAW EELFLFNNLT FNSVKETSSD LKSSSSSGGN LSLQPNGSNS 60 KGLSKSPACK REKRPYRGVR RRPWGKFAAE IRDPTRNGVR VWIGTFDTAE AAALAYDQAA 120 FLTRGFLATL NFSEQVVRES LKDMGFKTLK KDCSPVLELK RMHLMRAKSR AIRSSNDKKV 180 KRTCISGQLD ITQNVLVLED LGPEYLDQLL SSTSLENVGS WY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 3e-41 | ERF family protein |