PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027348154.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 407aa MW: 46130.4 Da PI: 9.5628

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027348154.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.2	5.4e-15	72	131	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d ++n k+ k+++lg + +e Aa+a++ a++k++g XP_027348154.1 72 SRFRGVSRHRWTGRFEAHLWDkGTWNPtqkKKgKQVYLGAYNDEEAAARAYDLAALKYWG 131 789****************888855566447***********************98 PP
2	AP2	52.3	1.4e-16	174	225	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g XP_027348154.1 174 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 225 89**99******99966...3.6***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MELAPVKSEL STRNHRLLMM DGVEVIATKC VKRRRRDSSM AVLGGNEQQG EQLEEQKQMS 60 GQSTATTVKR SSRFRGVSRH RWTGRFEAHL WDKGTWNPTQ KKKGKQVYLG AYNDEEAAAR 120 AYDLAALKYW GTTTFTNFPV SDYEKEIEIM KTVTKEEYLA SLRRRSSGFS RGVSKYRGVA 180 RHHHNGRWEA RIGRVFGNKY LYLGTYSTQE EAARAYDIAA IEYRGINAVT NFDLSTYIRW 240 LRPGAHSTAF QEQKPSTDPQ HFATSNSMQT RGNTELSNSL IHSFSTNELD SDKKQGFSKY 300 VTPLSPCNKS SSPTALGLLL KSSVFRELMQ RNLNTSNEEA EEVELKYSRE GNDGIGGGIY 360 DNDNTGTYLC SNINNRLPNL ESSEERSLPM YHGNVQSLWN GAFNMPN

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MELAPVKSEL STRNHRLLMM DGVEVIATKC VKRRRRDSSM AVLGGNEQQG EQLEEQKQMS  60
GQSTATTVKR SSRFRGVSRH RWTGRFEAHL WDKGTWNPTQ KKKGKQVYLG AYNDEEAAAR  120
AYDLAALKYW GTTTFTNFPV SDYEKEIEIM KTVTKEEYLA SLRRRSSGFS RGVSKYRGVA  180
RHHHNGRWEA RIGRVFGNKY LYLGTYSTQE EAARAYDIAA IEYRGINAVT NFDLSTYIRW  240
LRPGAHSTAF QEQKPSTDPQ HFATSNSMQT RGNTELSNSL IHSFSTNELD SDKKQGFSKY  300
VTPLSPCNKS SSPTALGLLL KSSVFRELMQ RNLNTSNEEA EEVELKYSRE GNDGIGGGIY  360
DNDNTGTYLC SNINNRLPNL ESSEERSLPM YHGNVQSLWN GAFNMPN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	98	106	PTQKKKGKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	2e-71	AP2 family protein