PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027345603.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 845aa    MW: 93048 Da    PI: 6.3668
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027345603.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.36.1e-191977357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le++++++++p  ++r++L +++    +++ +q+kvWFqNrR +ek+
  XP_027345603.1 19 KYVRYTPEQVEALERVYAECPKPCSSRRQQLVRECpilaNIEPKQIKVWFQNRRCREKQ 77
                    6789*****************************************************97 PP
2START174.66.2e-551663742205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++ +Wv++  +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d++ W ++++   +l  + +g  g+++lm
  XP_027345603.1 166 IAEETLTEFLSKATGTAVNWVQMIGMKPGPDSIGIIAVSRNCSGIAARACGLVSLDPT-KVAEILKDRPSWYRDCRCLNVLSIVPTGngGTIELM 259
                     789*******************************************************.8888888888************************** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++++a+++l++ Rdf+++Ry+ +l++g++vi+++S++s +  p+    s++vRae+lpSg+li+++++g+s v++v+hvdl+ ++++++lr+l+
  XP_027345603.1 260 YMQTYAPTTLAAaRDFWTIRYTTSLEDGSLVICERSLTSSTGGPSgpsASNFVRAEMLPSGYLIRSCDGGGSIVHIVDHVDLDVWSVPEVLRPLY 354
                     ******************************************9999999********************************************** PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s+ + ++k ++a+l++ ++
  XP_027345603.1 355 ESSKFLAQKLTTAALRHVRQ 374
                     ***************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 845 aa     Download sequence    
MALSMHTDSS SNKHMDSSKY VRYTPEQVEA LERVYAECPK PCSSRRQQLV RECPILANIE  60
PKQIKVWFQN RRCREKQRKE ASRLQTVNRK LTAMNKLLME ENDRLQKQVS QLVYENGYMK  120
QQIQTASTTT DNSCESVVMS GQNQQQNPKM SHPQWDANNP AGLLSIAEET LTEFLSKATG  180
TAVNWVQMIG MKPGPDSIGI IAVSRNCSGI AARACGLVSL DPTKVAEILK DRPSWYRDCR  240
CLNVLSIVPT GNGGTIELMY MQTYAPTTLA AARDFWTIRY TTSLEDGSLV ICERSLTSST  300
GGPSGPSASN FVRAEMLPSG YLIRSCDGGG SIVHIVDHVD LDVWSVPEVL RPLYESSKFL  360
AQKLTTAALR HVRQIAQESS GEVHYGGGRQ PAVLRTFSQK LCRGFNDAVN GFVDDGWSLI  420
SNDGVEDVTL AINSSLNKFF GSHYNSSMLP AFGGGVLCAK ASMLLQNVPP PLLVRFLREH  480
RSEWADYGVD AYSAACHKAS PYAVPCARPS GFPSSQVILP LAHTIEHEEF LEVVRIEGHA  540
FSPEDVTSAR DMFLLQLCSG VDENAIGACA QLVFAPIDES FADDALSLPS GFRVIPLDTK  600
ADGPASSRTL DLASSLEIGS GNTRPAGEGD LNDYNIRSVL TIAFQFTFEN HLRDNVAVMA  660
RQYVRSVVRS VQRVAMAIAP SRLSTQLGPK SLPGPPEALT LARWICTSYR ILTCTELFRV  720
ESTAGDAILK QLWHHSDAIL CCSVKTNASP VFTFANQAGL DMLETTLVAL QDIMLDKVLD  780
EAGRKILCIE FSKIMQQGFA YLPAGMCVSS MNRPVSYEQA IAWKVLDDDD SNHCLAFMFM  840
NWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein