PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027343835.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family LFY
Protein Properties Length: 386aa    MW: 44114.8 Da    PI: 8.3853
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027343835.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY593.83.8e-18113711385
         FLO_LFY   1 mdpeafsas.lfkwdpraaa.aapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmksl 93 
                     md++af+++ lfkwdpr+   +ap +r+   +   +           r+  ele+lf+ayGvry t+ak+aelGftvstLv+m +eeldd+++sl
  XP_027343835.1   1 MDQDAFTSNnLFKWDPRTFLpMAPCTRVPLLEYSIA---------PPRAPTELEDLFRAYGVRYHTAAKVAELGFTVSTLVNMMEEELDDMINSL 86 
                     9****98876******98872334444433333333.........3456789******************************************* PP

         FLO_LFY  94 seifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglgeaelvaaeekkseeekkka 188
                     s+ifr+dll GeryGikaavra+rrr++ ++   +rr+l    + +aldalsqegls+e+  e+++++  g++g +++++v   e+     +k++
  XP_027343835.1  87 SHIFRWDLLFGERYGIKAAVRAQRRRIHGDD--MRRRNLNDGTTINALDALSQEGLSKEAIVEQEKEVI-GNRGGSAWGVVSGGER-----RKQQ 173
                     ****************************977..7777777777888*************9987544444.4444479999999843.....3333 PP

         FLO_LFY 189 skkkqkrkkkkelkse.ededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvt 282
                     ++++++r+k++e+  + e+ +eee e +d+ g++++g  rqrehPfivtepgevargkknGLDYLf+Ly+qCr+fL+qvq+iak+rGekcPtkvt
  XP_027343835.1 174 NRRRRRRRKMNEHDGDlEEAEEEEGEGDDDGGNNNSGCVRQREHPFIVTEPGEVARGKKNGLDYLFHLYDQCRDFLIQVQNIAKNRGEKCPTKVT 268
                     33334444444433333666777777788888999999********************************************************* PP

         FLO_LFY 283 nqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqL 377
                     n+vfryakkagasyinkPkmrhYvhCYalhcLde+asn+lrra kergenvGawrqacykplvaia+ qgwdida+fn+hprLsiWYvPtkLrqL
  XP_027343835.1 269 NEVFRYAKKAGASYINKPKMRHYVHCYALHCLDEQASNELRRALKERGENVGAWRQACYKPLVAIASLQGWDIDAIFNSHPRLSIWYVPTKLRQL 363
                     *********************************************************************************************** PP

         FLO_LFY 378 Chlerska 385
                     Ch++r+++
  XP_027343835.1 364 CHAQRNTN 371
                     *****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MDQDAFTSNN LFKWDPRTFL PMAPCTRVPL LEYSIAPPRA PTELEDLFRA YGVRYHTAAK  60
VAELGFTVST LVNMMEEELD DMINSLSHIF RWDLLFGERY GIKAAVRAQR RRIHGDDMRR  120
RNLNDGTTIN ALDALSQEGL SKEAIVEQEK EVIGNRGGSA WGVVSGGERR KQQNRRRRRR  180
RKMNEHDGDL EEAEEEEGEG DDDGGNNNSG CVRQREHPFI VTEPGEVARG KKNGLDYLFH  240
LYDQCRDFLI QVQNIAKNRG EKCPTKVTNE VFRYAKKAGA SYINKPKMRH YVHCYALHCL  300
DEQASNELRR ALKERGENVG AWRQACYKPL VAIASLQGWD IDAIFNSHPR LSIWYVPTKL  360
RQLCHAQRNT NVAPSSLSVA TAHLPF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1169181RRKQQNRRRRRRR
2175180RRRRRR
3175181RRRRRRR
4176181RRRRRR
5176182RRRRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-140LFY family protein