PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027341321.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 740aa MW: 80756 Da PI: 9.5103

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027341321.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	35.9	1.8e-11	35	84	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 + W t+E++ll++av+++G ++W+t+a +++ + t+ +c ++++ XP_027341321.1 35 QVWGTWEELLLACAVNRHGFKDWDTVAMEVQsrttrLLATARHCEQKFHD 84 68*****************************9999999999999999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 740 aa Download sequence
MVKGIISFFS YRMENHQNHK AEPDAEQEES HHHNQVWGTW EELLLACAVN RHGFKDWDTV 60 AMEVQSRTTR LLATARHCEQ KFHDLNRRFA DQCNDDVPPP CQNGAAAGDN SDHVPWLDEL 120 RKLRVAELRR EVQRRDVSIL SLQLEVKRLE EEKAKENDGK EDEKPDLAVS GDARPENDKT 180 GGEVEEAGPA NSEPEIRRLD ESTTNTDKML PTTGDESDRE NQSVNESNST GSRFEKTGEG 240 DAKLGPGPVP VHSGPKEPDP VGRKGKPVGE ESNNGSYDTL AKVPTCESVP PSEERKVEED 300 GSSELHDSVA HSGEGGTRES SEVQSSASLT RKRKTRRRKE VSGGDPQGGE VAPENDEVAM 360 AKSEPLVGVL ELIKGHEQSS LFERRLESQE SDRYKDIVKQ HVDLETIHLT LQKGLYSSCT 420 SAFYRDLLLL FTNATVFFPH DSTESRAARQ LHRLVTAEMK NHGQTQSDSI PRKNDSLPPN 480 APLAKPDSLL SKHKASAPIL VCRKRSSISA KPSSATFGQK GDQPIFNDKK ERTPSDAKPP 540 LKPSSSDTDE EEVPKAKEKP VTGARSLRRS NKNLNNKKLP SNSTPKTGSS ASKPPETPRP 600 EKSKAEGGTD KKRNAAADFL KRIKRNTSVE ASRGGGGGSG GGSSSGSRGG GGGVSAKEQK 660 KVVNNGKGEK GKERASRYNS GGGSGDKRNN KNIENNSQSK RSVGRPPKKA AETNAGSAKR 720 GRESSASASK DKRPKKRSKK

Sequence ? help Back to Top

Protein Sequence Length: 740 aa Download sequence

MVKGIISFFS YRMENHQNHK AEPDAEQEES HHHNQVWGTW EELLLACAVN RHGFKDWDTV  60
AMEVQSRTTR LLATARHCEQ KFHDLNRRFA DQCNDDVPPP CQNGAAAGDN SDHVPWLDEL  120
RKLRVAELRR EVQRRDVSIL SLQLEVKRLE EEKAKENDGK EDEKPDLAVS GDARPENDKT  180
GGEVEEAGPA NSEPEIRRLD ESTTNTDKML PTTGDESDRE NQSVNESNST GSRFEKTGEG  240
DAKLGPGPVP VHSGPKEPDP VGRKGKPVGE ESNNGSYDTL AKVPTCESVP PSEERKVEED  300
GSSELHDSVA HSGEGGTRES SEVQSSASLT RKRKTRRRKE VSGGDPQGGE VAPENDEVAM  360
AKSEPLVGVL ELIKGHEQSS LFERRLESQE SDRYKDIVKQ HVDLETIHLT LQKGLYSSCT  420
SAFYRDLLLL FTNATVFFPH DSTESRAARQ LHRLVTAEMK NHGQTQSDSI PRKNDSLPPN  480
APLAKPDSLL SKHKASAPIL VCRKRSSISA KPSSATFGQK GDQPIFNDKK ERTPSDAKPP  540
LKPSSSDTDE EEVPKAKEKP VTGARSLRRS NKNLNNKKLP SNSTPKTGSS ASKPPETPRP  600
EKSKAEGGTD KKRNAAADFL KRIKRNTSVE ASRGGGGGSG GGSSSGSRGG GGGVSAKEQK  660
KVVNNGKGEK GKERASRYNS GGGSGDKRNN KNIENNSQSK RSVGRPPKKA AETNAGSAKR  720
GRESSASASK DKRPKKRSKK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	330	335	TRKRKT
2	331	340	RKRKTRRRKE
3	333	342	RKRKTRRRKE
4	732	740	KRPKKRSKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44430.1	2e-85	MYB_related family protein