PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027333152.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | NAC | ||||||||
Protein Properties | Length: 274aa MW: 31000.9 Da PI: 6.2523 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 83.9 | 3.2e-26 | 9 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLp.k.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 lppG+rFhP++e l+ +yL++k e+++ + ++ i+e+d+y ++P +Lp + + + ++ ++F+ + k kr +r++ksg+W +g XP_027333152.1 9 LPPGCRFHPSEELLLRYYLTNKNENREgdFYGSDLIRELDLYGYDPFELPdAacfsyGY--RGRKRHWFCYTVKVP---KRGTRKVKSGFWLRKG 98 79*********************999966555678**************9536664333..444455555554443...367788899******* PP NAM 88 kdkevlsk.kgelvglkktLvfykg.rapkgektdWvmheyrl 128 + ++v+ + ++++ g+++ +vfy g + +++++tdW++ ey+l XP_027333152.1 99 RVRDVFGNgGNAVLGTRTRFVFYVGnSVKSATRTDWILYEYAL 141 ******99566679*********883567789*********87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MEDQHRATLP PGCRFHPSEE LLLRYYLTNK NENREGDFYG SDLIRELDLY GYDPFELPDA 60 ACFSYGYRGR KRHWFCYTVK VPKRGTRKVK SGFWLRKGRV RDVFGNGGNA VLGTRTRFVF 120 YVGNSVKSAT RTDWILYEYA LVDRVLASFA LCRVFNKPHQ KNSPSEIGLS CYAEESVSAV 180 RHVGVQCDGY VRSDVVEAIV CDDNRKNEIT ELPIRCGGEH DDSAALPVSV VQGSQQERLC 240 GLPGGSAFFI EAVTSQQLLS ILEEEDFIEL NDIA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17980.1 | 6e-23 | NAC family protein |