PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027332922.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 619aa MW: 67923.5 Da PI: 7.1542

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027332922.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	51.1	3.4e-16	257	316	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_027332922.1 257 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 316 78*****************988886678446***********************98 PP
2	AP2	45.4	2.1e-14	361	410	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_027332922.1 361 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 410 9*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 619 aa Download sequence
MCFGVGENSA FHSPLAMMPL KSDGSLCIME ALSRSQTQVM VPTSSPKLED FLGGATMGAQ 60 DYGGHEREAM ALSLDSIYYN SQNIEPQANR DHSSSLDLLS DPFRHQQSHP YYSGLACHGI 120 YQAPLEEETK QSHVTVCSSQ MPQVVEEGIA CFKNWVPPRE YSSSLEQHQV NSSTLGDNDH 180 GASGSVGVGT VGCGDLQPLS LSMSPGSQSS CVTVPTQISP SGTDSVTVDA KKRGPAKLGQ 240 KQPVHRKSID TFGQRTSQYR GVTRHRWTGR YEAHLWDNSC KKEGQTRKGR QVYLGGYDME 300 EKAARAYDLA ALKYWGPSTH INFPLENYQA ELEEMKNMSR QEYVAHLRRK SSGFSRGASM 360 YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FSTQEEAAEA YDVAAIKFRG VNAVTNFDIS 420 RYDVERIMAS NTLLAGELAR RNKESEPRTE AIEYNVVSSQ QIISREEVEN VNNNENGSSD 480 WKMGLYQSPQ QESKSCDQKS MKCGNYRGSA FSVALQDLIG IDSVGSSQGM LDESTKRGTH 540 FSNPSSLVTS LSSSREGSPD KTGPTLLLPK PPMGSKIVNS SSSIANGVST VNSWFPSQLR 600 PATTISMSHL PVFAAWSDA

Sequence ? help Back to Top

Protein Sequence Length: 619 aa Download sequence

MCFGVGENSA FHSPLAMMPL KSDGSLCIME ALSRSQTQVM VPTSSPKLED FLGGATMGAQ  60
DYGGHEREAM ALSLDSIYYN SQNIEPQANR DHSSSLDLLS DPFRHQQSHP YYSGLACHGI  120
YQAPLEEETK QSHVTVCSSQ MPQVVEEGIA CFKNWVPPRE YSSSLEQHQV NSSTLGDNDH  180
GASGSVGVGT VGCGDLQPLS LSMSPGSQSS CVTVPTQISP SGTDSVTVDA KKRGPAKLGQ  240
KQPVHRKSID TFGQRTSQYR GVTRHRWTGR YEAHLWDNSC KKEGQTRKGR QVYLGGYDME  300
EKAARAYDLA ALKYWGPSTH INFPLENYQA ELEEMKNMSR QEYVAHLRRK SSGFSRGASM  360
YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FSTQEEAAEA YDVAAIKFRG VNAVTNFDIS  420
RYDVERIMAS NTLLAGELAR RNKESEPRTE AIEYNVVSSQ QIISREEVEN VNNNENGSSD  480
WKMGLYQSPQ QESKSCDQKS MKCGNYRGSA FSVALQDLIG IDSVGSSQGM LDESTKRGTH  540
FSNPSSLVTS LSSSREGSPD KTGPTLLLPK PPMGSKIVNS SSSIANGVST VNSWFPSQLR  600
PATTISMSHL PVFAAWSDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-137	AP2 family protein