PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027331370.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 815aa    MW: 90737.5 Da    PI: 5.603
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027331370.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.75.2e-2430131199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++p++ ae+        +++++ ++l+++d++ ++W++++iyr++++r++lt+GW+ Fv +++L++gD+v+F   ++++
  XP_027331370.1  30 FCKTLTASDTSTHGGFSVPRRAAEKLfppldyTIQPPT-QELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFI--RDEK 121
                     99*********************999*****9555555.49************************************************..4577 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                      +l+v+v+r 
  XP_027331370.1 122 SQLRVGVRRV 131
                     778****985 PP
2Auxin_resp113.71.7e-37156239183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+++s+F+++YnPra++seFv++++k++ka+  ++vsvGmRf m+fete+s +rr++Gt+vg+sd+dp+rWp+SkWr+++
  XP_027331370.1 156 AAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKAVFgTHVSVGMRFGMMFETEESGKRRYMGTIVGISDVDPLRWPGSKWRNIQ 239
                     79********************************9889*******************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 815 aa     Download sequence    
MTLQPLNSEK EVFPISDFGL KHSKHPSEFF CKTLTASDTS THGGFSVPRR AAEKLFPPLD  60
YTIQPPTQEL VVRDLHDNTW TFRHIYRGQP KRHLLTTGWS LFVGSKRLRA GDSVLFIRDE  120
KSQLRVGVRR VNRQQTTLPS SVLSADSMHI GVLAAAAHAA ANRSPFTIFY NPRACPSEFV  180
IPLAKYRKAV FGTHVSVGMR FGMMFETEES GKRRYMGTIV GISDVDPLRW PGSKWRNIQV  240
EWDEPGCGDK QNRVSVWEIE TPESLFIFPS LTSSLKRPLQ SGLLENEWGT LLRRPFIRVP  300
ENGTMELSNS IPNLYSEHLM KMLLKPQLIN NNGAFLSVMQ QESAAMRAPL QEMMKTTLAT  360
HTQKVHLACT ENTSLKNLHS QSIPDQPNAL NMQSLLKSDQ PEKLQPLPIG TVTDKSKIES  420
EVLPDHMIDY PSVEGCNIEK VAANPVNQQG LASQLTFHNQ NQNPLLTQSN PWPMQPQLES  480
SIPHPQLIDV GQADSAIVNG LLPQLEIDEW MVYASSQPFA GQNRSTLPLS DLQEHSSLQP  540
QAVNPSLTSV NQEVWDHYVK NLKFLSQSDQ LTSVCQPGLY GLNGMSSSNN LRDLSAESNN  600
QSEICVNVDV SNSVSTTMVD PSTSSTILDE LCTMKDREFQ NPQDCMVGNL SSSQDVQSQI  660
TSASLAESHA FPLRDIADNS GGTSSSHVDF DESSFLQNNS WQQVPAPIRT YTKVQKAGSV  720
GRSIDVTTFK NYEELIRAIE CMFGLDGLLN DTKGSGWKLV YVDYENDVLL VGDDPWEEFV  780
GCVRCIRILS PSEVQQMSEE GMKLLNSGAL QGINV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.10.0ARF family protein