PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027329956.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 1144aa MW: 126541 Da PI: 9.6939

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027329956.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.1	2.3e-09	55	90	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE el+++a +++G++ Wk++a + +R+ +++ XP_027329956.1 55 QWSKEELELFYEAYRKYGKD-WKKVALAVR-NRSVEMV 90 6***************99.*****.98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1144 aa Download sequence
MPPSRKSRSV NKRFSNVREA ASNKDKIAEN ASKNKQKASP GIQKKRKLAD MLGPQWSKEE 60 LELFYEAYRK YGKDWKKVAL AVRNRSVEMV EALYTMNRAY LSLPEGTASV VGLIAMMTDH 120 YSVLGGSDSG KESNDDAEIA KRSQKRLRGK QLNDNKALDG HFSDHSQSHS VASGDGCLSL 180 LKKRHSGIKP HAVRKRTPRV PISYSIALTE ASQRGGSSKI SGSPDKKSIP SPGLKSGKQR 240 AKSEIAGGKF CNSDLDDGSS ELSLGSTEGD NGDYSRKTIH QSGRGNTGRG RNQEKRIKQY 300 GKNLEPEENL NKHLNDIKEA SSGTDDGKNP SFIKSNFDTD FSYAKNARSS YKGSRKNSKN 360 LQIEKDEGSA FDALKALADL SLMLPITNPY TESSAHLKEG NHDVVDESKM ETHNVFPRIK 420 TTASSKLSKA FSDNGAAVPE AEGEQQLNAG FRKRKQKSFT LKNDETHTGS QLSGSQKTKA 480 ADEVKKSMVK GKRSSVSTAH SRLLKMVKSP GNMSSSTNDK GERDDSSFSP MKVSSTNPVS 540 QVNRGRPRRK MEKPKPMAQQ DSLVCGNIFS SQHNKSITSL EDNSSIHKGK LINCLSSYQT 600 RRWCTFEWFY SAIDYPWFSK REFVEYLDHV GLGHVPRLTR IEWGVIRSSL GRPRRFSEQF 660 LIEEKHKLNQ YRESVRSHYA EILAGTKEGL PTDLAQPLIV GQRVIAIHPR TREIHDGSVL 720 TVDHCRYRVQ FDQPDLGVEF VKDIDCMPFH PFENMPTSLL QHNVTSAQIH ENLNEVKLNG 780 KLKQRKVAEH TILSPSDNSD SIKSLYISST MPGSSTLSKK GFTSSSKLQP KVVCGEIGNA 840 QLASSSQPSL LEHVHSKEAD ILAISELARA LDKKEFVLSE LKHMNDGVSE SQKYGDSSVK 900 DSEPFKRNYA SVLKQLTEAN EQVSSALFCL RQRNTYQASS SVMSLKPMAN FDDPGGQASS 960 SNCSACHNQE SIFQSHIAEI VESSRRKART MVVQATQAMS NLSKVERIED AINFMNNRLS 1020 VDDPTASATT LLPADSLTMT SQDQLTASTL NPLASCQVQD AELNSSSDPN EMKIPSELIS 1080 HCLATLLMIQ KCTERQFPPA DVAQVLDSAV TSLQPLCSKN LPIYGEIQKC MGIIRNQILA 1140 LIPT

Sequence ? help Back to Top

Protein Sequence Length: 1144 aa Download sequence

MPPSRKSRSV NKRFSNVREA ASNKDKIAEN ASKNKQKASP GIQKKRKLAD MLGPQWSKEE  60
LELFYEAYRK YGKDWKKVAL AVRNRSVEMV EALYTMNRAY LSLPEGTASV VGLIAMMTDH  120
YSVLGGSDSG KESNDDAEIA KRSQKRLRGK QLNDNKALDG HFSDHSQSHS VASGDGCLSL  180
LKKRHSGIKP HAVRKRTPRV PISYSIALTE ASQRGGSSKI SGSPDKKSIP SPGLKSGKQR  240
AKSEIAGGKF CNSDLDDGSS ELSLGSTEGD NGDYSRKTIH QSGRGNTGRG RNQEKRIKQY  300
GKNLEPEENL NKHLNDIKEA SSGTDDGKNP SFIKSNFDTD FSYAKNARSS YKGSRKNSKN  360
LQIEKDEGSA FDALKALADL SLMLPITNPY TESSAHLKEG NHDVVDESKM ETHNVFPRIK  420
TTASSKLSKA FSDNGAAVPE AEGEQQLNAG FRKRKQKSFT LKNDETHTGS QLSGSQKTKA  480
ADEVKKSMVK GKRSSVSTAH SRLLKMVKSP GNMSSSTNDK GERDDSSFSP MKVSSTNPVS  540
QVNRGRPRRK MEKPKPMAQQ DSLVCGNIFS SQHNKSITSL EDNSSIHKGK LINCLSSYQT  600
RRWCTFEWFY SAIDYPWFSK REFVEYLDHV GLGHVPRLTR IEWGVIRSSL GRPRRFSEQF  660
LIEEKHKLNQ YRESVRSHYA EILAGTKEGL PTDLAQPLIV GQRVIAIHPR TREIHDGSVL  720
TVDHCRYRVQ FDQPDLGVEF VKDIDCMPFH PFENMPTSLL QHNVTSAQIH ENLNEVKLNG  780
KLKQRKVAEH TILSPSDNSD SIKSLYISST MPGSSTLSKK GFTSSSKLQP KVVCGEIGNA  840
QLASSSQPSL LEHVHSKEAD ILAISELARA LDKKEFVLSE LKHMNDGVSE SQKYGDSSVK  900
DSEPFKRNYA SVLKQLTEAN EQVSSALFCL RQRNTYQASS SVMSLKPMAN FDDPGGQASS  960
SNCSACHNQE SIFQSHIAEI VESSRRKART MVVQATQAMS NLSKVERIED AINFMNNRLS  1020
VDDPTASATT LLPADSLTMT SQDQLTASTL NPLASCQVQD AELNSSSDPN EMKIPSELIS  1080
HCLATLLMIQ KCTERQFPPA DVAQVLDSAV TSLQPLCSKN LPIYGEIQKC MGIIRNQILA  1140
LIPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	452	479	RKRKQKSFTLKNDETHTGSQLSGSQKTK
2	546	550	RPRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein