PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027329955.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 1149aa MW: 127204 Da PI: 9.7251

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027329955.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.1	2.3e-09	55	90	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE el+++a +++G++ Wk++a + +R+ +++ XP_027329955.1 55 QWSKEELELFYEAYRKYGKD-WKKVALAVR-NRSVEMV 90 6***************99.*****.98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1149 aa Download sequence
MPPSRKSRSV NKRFSNVREA ASNKDKIAEN ASKNKQKASP GIQKKRKLAD MLGPQWSKEE 60 LELFYEAYRK YGKDWKKVAL AVRNRSVEMV EALYTMNRAY LSLPEGTASV VGLIAMMTDH 120 YSVLGGSDSG KESNDDAEIA KRSQKRLRGK QLNDNKALDG HFSDHSQSHS VASGDGCLSL 180 LKKRHSGIKP HAVRKRTPRV PISYSIGKDN GEKFFSSVRQ SSKQMLDTND VAHKIALALT 240 EASQRGGSSK ISGSPDKKSI PSPGLKSGKQ RAKSEIAGGK FCNSDLDDGS SELSLGSTEG 300 DNGDYSRKTI HQSGRGNTGR GRNQEKRIKQ YGKNLEPEEN LNKHLNDIKE ASSGTDDGKN 360 PSFIKSNFDT DFSYAKNARS SYKGSRKNSK NLQIEKDEGS AFDALKALAD LSLMLPITNP 420 YTESSAHLKE GNHDVVDESK METHNVFPRI KTTASSKLSK AFSDNGAAVP EAEGEQQLNA 480 GFRKRKQKSF TLKNDETHTG SQLSGSQKTK AADEVKKSMV KGKRSSVSTA HSRLLKMVSS 540 TNPVSQVNRG RPRRKMEKPK PMAQQDSLVC GNIFSSQHNK SITSLEDNSS IHKGKLINCL 600 SSYQTRRWCT FEWFYSAIDY PWFSKREFVE YLDHVGLGHV PRLTRIEWGV IRSSLGRPRR 660 FSEQFLIEEK HKLNQYRESV RSHYAEILAG TKEGLPTDLA QPLIVGQRVI AIHPRTREIH 720 DGSVLTVDHC RYRVQFDQPD LGVEFVKDID CMPFHPFENM PTSLLQHNVT SAQIHENLNE 780 VKLNGKLKQR KVAEHTILSP SDNSDSIKSL YISSTMPGSS TLSKKGFTSS SKLQPKVVCG 840 EIGNAQLASS SQPSLLEHVH SKEADILAIS ELARALDKKE FVLSELKHMN DGVSESQKYG 900 DSSVKDSEPF KRNYASVLKQ LTEANEQVSS ALFCLRQRNT YQASSSVMSL KPMANFDDPG 960 GQASSSNCSA CHNQESIFQS HIAEIVESSR RKARTMVVQA TQAMSNLSKV ERIEDAINFM 1020 NNRLSVDDPT ASATTLLPAD SLTMTSQDQL TASTLNPLAS CQVQDAELNS SSDPNEMKIP 1080 SELISHCLAT LLMIQKCTER QFPPADVAQV LDSAVTSLQP LCSKNLPIYG EIQKCMGIIR 1140 NQILALIPT

Sequence ? help Back to Top

Protein Sequence Length: 1149 aa Download sequence

MPPSRKSRSV NKRFSNVREA ASNKDKIAEN ASKNKQKASP GIQKKRKLAD MLGPQWSKEE  60
LELFYEAYRK YGKDWKKVAL AVRNRSVEMV EALYTMNRAY LSLPEGTASV VGLIAMMTDH  120
YSVLGGSDSG KESNDDAEIA KRSQKRLRGK QLNDNKALDG HFSDHSQSHS VASGDGCLSL  180
LKKRHSGIKP HAVRKRTPRV PISYSIGKDN GEKFFSSVRQ SSKQMLDTND VAHKIALALT  240
EASQRGGSSK ISGSPDKKSI PSPGLKSGKQ RAKSEIAGGK FCNSDLDDGS SELSLGSTEG  300
DNGDYSRKTI HQSGRGNTGR GRNQEKRIKQ YGKNLEPEEN LNKHLNDIKE ASSGTDDGKN  360
PSFIKSNFDT DFSYAKNARS SYKGSRKNSK NLQIEKDEGS AFDALKALAD LSLMLPITNP  420
YTESSAHLKE GNHDVVDESK METHNVFPRI KTTASSKLSK AFSDNGAAVP EAEGEQQLNA  480
GFRKRKQKSF TLKNDETHTG SQLSGSQKTK AADEVKKSMV KGKRSSVSTA HSRLLKMVSS  540
TNPVSQVNRG RPRRKMEKPK PMAQQDSLVC GNIFSSQHNK SITSLEDNSS IHKGKLINCL  600
SSYQTRRWCT FEWFYSAIDY PWFSKREFVE YLDHVGLGHV PRLTRIEWGV IRSSLGRPRR  660
FSEQFLIEEK HKLNQYRESV RSHYAEILAG TKEGLPTDLA QPLIVGQRVI AIHPRTREIH  720
DGSVLTVDHC RYRVQFDQPD LGVEFVKDID CMPFHPFENM PTSLLQHNVT SAQIHENLNE  780
VKLNGKLKQR KVAEHTILSP SDNSDSIKSL YISSTMPGSS TLSKKGFTSS SKLQPKVVCG  840
EIGNAQLASS SQPSLLEHVH SKEADILAIS ELARALDKKE FVLSELKHMN DGVSESQKYG  900
DSSVKDSEPF KRNYASVLKQ LTEANEQVSS ALFCLRQRNT YQASSSVMSL KPMANFDDPG  960
GQASSSNCSA CHNQESIFQS HIAEIVESSR RKARTMVVQA TQAMSNLSKV ERIEDAINFM  1020
NNRLSVDDPT ASATTLLPAD SLTMTSQDQL TASTLNPLAS CQVQDAELNS SSDPNEMKIP  1080
SELISHCLAT LLMIQKCTER QFPPADVAQV LDSAVTSLQP LCSKNLPIYG EIQKCMGIIR  1140
NQILALIPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	483	510	RKRKQKSFTLKNDETHTGSQLSGSQKTK
2	551	555	RPRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein