PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027329954.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 1162aa MW: 128580 Da PI: 9.6869

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027329954.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.1	2.3e-09	55	90	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE el+++a +++G++ Wk++a + +R+ +++ XP_027329954.1 55 QWSKEELELFYEAYRKYGKD-WKKVALAVR-NRSVEMV 90 6***************99.*****.98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1162 aa Download sequence
MPPSRKSRSV NKRFSNVREA ASNKDKIAEN ASKNKQKASP GIQKKRKLAD MLGPQWSKEE 60 LELFYEAYRK YGKDWKKVAL AVRNRSVEMV EALYTMNRAY LSLPEGTASV VGLIAMMTDH 120 YSVLGGSDSG KESNDDAEIA KRSQKRLRGK QLNDNKALDG HFSDHSQSHS VASGIKPHAV 180 RKRTPRVPIS YSIGKDNGEK FFSSVRQSSK QMLDTNDVAH KIALALTEAS QRGGSSKISG 240 SPDKKSIPSP GLKSGKQRAK SEIAGGKFCN SDLDDGSSEL SLGSTEGDNG DYSRKTIHQS 300 GRGNTGRGRN QEKRIKQYGK NLEPEENLNK HLNDIKEASS GTDDGKNPSF IKSNFDTDFS 360 YAKNARSSYK GSRKNSKNLQ IEKDEGSAFD ALKALADLSL MLPITNPYTE SSAHLKEGNH 420 DVVDESKMET HNVFPRIKTT ASSKLSKAFS DNGAAVPEAE GEQQLNAGFR KRKQKSFTLK 480 NDETHTGSQL SGSQKTKAAD EVKKSMVKGK RSSVSTAHSR LLKMVKSPGN MSSSTNDKGE 540 RDDSSFSPMK VSSTNPVSQV NRGRPRRKME KPKPMAQQDS LVCGNIFSSQ HNKSITSLED 600 NSSIHKGKLI NCLSSYQTRR WCTFEWFYSA IDYPWFSKRE FVEYLDHVGL GHVPRLTRIE 660 WGVIRSSLGR PRRFSEQFLI EEKHKLNQYR ESVRSHYAEI LAGTKEGLPT DLAQPLIVGQ 720 RVIAIHPRTR EIHDGSVLTV DHCRYRVQFD QPDLGVEFVK DIDCMPFHPF ENMPTSLLQH 780 NVTSAQIHEN LNEVKLNGKL KQRKVAEHTI LSPSDNSDSI KSLYISSTMP GSSTLSKKGF 840 TSSSKLQPKV VCGEIGNAQL ASSSQPSLLE HVHSKEADIL AISELARALD KKEFVLSELK 900 HMNDGVSESQ KYGDSSVKDS EPFKRNYASV LKQLTEANEQ VSSALFCLRQ RNTYQASSSV 960 MSLKPMANFD DPGGQASSSN CSACHNQESI FQSHIAEIVE SSRRKARTMV VQATQAMSNL 1020 SKVERIEDAI NFMNNRLSVD DPTASATTLL PADSLTMTSQ DQLTASTLNP LASCQVQDAE 1080 LNSSSDPNEM KIPSELISHC LATLLMIQKC TERQFPPADV AQVLDSAVTS LQPLCSKNLP 1140 IYGEIQKCMG IIRNQILALI PT

Sequence ? help Back to Top

Protein Sequence Length: 1162 aa Download sequence

MPPSRKSRSV NKRFSNVREA ASNKDKIAEN ASKNKQKASP GIQKKRKLAD MLGPQWSKEE  60
LELFYEAYRK YGKDWKKVAL AVRNRSVEMV EALYTMNRAY LSLPEGTASV VGLIAMMTDH  120
YSVLGGSDSG KESNDDAEIA KRSQKRLRGK QLNDNKALDG HFSDHSQSHS VASGIKPHAV  180
RKRTPRVPIS YSIGKDNGEK FFSSVRQSSK QMLDTNDVAH KIALALTEAS QRGGSSKISG  240
SPDKKSIPSP GLKSGKQRAK SEIAGGKFCN SDLDDGSSEL SLGSTEGDNG DYSRKTIHQS  300
GRGNTGRGRN QEKRIKQYGK NLEPEENLNK HLNDIKEASS GTDDGKNPSF IKSNFDTDFS  360
YAKNARSSYK GSRKNSKNLQ IEKDEGSAFD ALKALADLSL MLPITNPYTE SSAHLKEGNH  420
DVVDESKMET HNVFPRIKTT ASSKLSKAFS DNGAAVPEAE GEQQLNAGFR KRKQKSFTLK  480
NDETHTGSQL SGSQKTKAAD EVKKSMVKGK RSSVSTAHSR LLKMVKSPGN MSSSTNDKGE  540
RDDSSFSPMK VSSTNPVSQV NRGRPRRKME KPKPMAQQDS LVCGNIFSSQ HNKSITSLED  600
NSSIHKGKLI NCLSSYQTRR WCTFEWFYSA IDYPWFSKRE FVEYLDHVGL GHVPRLTRIE  660
WGVIRSSLGR PRRFSEQFLI EEKHKLNQYR ESVRSHYAEI LAGTKEGLPT DLAQPLIVGQ  720
RVIAIHPRTR EIHDGSVLTV DHCRYRVQFD QPDLGVEFVK DIDCMPFHPF ENMPTSLLQH  780
NVTSAQIHEN LNEVKLNGKL KQRKVAEHTI LSPSDNSDSI KSLYISSTMP GSSTLSKKGF  840
TSSSKLQPKV VCGEIGNAQL ASSSQPSLLE HVHSKEADIL AISELARALD KKEFVLSELK  900
HMNDGVSESQ KYGDSSVKDS EPFKRNYASV LKQLTEANEQ VSSALFCLRQ RNTYQASSSV  960
MSLKPMANFD DPGGQASSSN CSACHNQESI FQSHIAEIVE SSRRKARTMV VQATQAMSNL  1020
SKVERIEDAI NFMNNRLSVD DPTASATTLL PADSLTMTSQ DQLTASTLNP LASCQVQDAE  1080
LNSSSDPNEM KIPSELISHC LATLLMIQKC TERQFPPADV AQVLDSAVTS LQPLCSKNLP  1140
IYGEIQKCMG IIRNQILALI PT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	470	497	RKRKQKSFTLKNDETHTGSQLSGSQKTK
2	564	568	RPRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein