PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027329953.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 1174aa MW: 129847 Da PI: 9.7174

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027329953.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.1	2.4e-09	55	90	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE el+++a +++G++ Wk++a + +R+ +++ XP_027329953.1 55 QWSKEELELFYEAYRKYGKD-WKKVALAVR-NRSVEMV 90 6***************99.*****.98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1174 aa Download sequence
MPPSRKSRSV NKRFSNVREA ASNKDKIAEN ASKNKQKASP GIQKKRKLAD MLGPQWSKEE 60 LELFYEAYRK YGKDWKKVAL AVRNRSVEMV EALYTMNRAY LSLPEGTASV VGLIAMMTDH 120 YSVLGGSDSG KESNDDAEIA KRSQKRLRGK QLNDNKALDG HFSDHSQSHS VASGDGCLSL 180 LKKRHSGIKP HAVRKRTPRV PISYSIGKDN GEKFFSSVRQ SSKQMLDTND VAHKIALALT 240 EASQRGGSSK ISGSPDKKSI PSPGLKSGKR AKSEIAGGKF CNSDLDDGSS ELSLGSTEGD 300 NGDYSRKTIH QSGRGNTGRG RNQEKRIKQY GKNLEPEENL NKHLNDIKEA SSGTDDGKNP 360 SFIKSNFDTD FSYAKNARSS YKGSRKNSKN LQIEKDEGSA FDALKALADL SLMLPITNPY 420 TESSAHLKEG NHDVVDESKM ETHNVFPRIK TTASSKLSKA FSDNGAAVPE AEGEQQLNAG 480 FRKRKQKSFT LKNDETHTGS QLSGSQKTKA ADEVKKSMVK GKRSSVSTAH SRLLKMVKSP 540 GNMSSSTNDK GERDDSSFSP MKVSSTNPVS QVNRGRPRRK MEKPKPMAQQ DSLVCGNIFS 600 SQHNKSITSL EDNSSIHKGK LINCLSSYQT RRWCTFEWFY SAIDYPWFSK REFVEYLDHV 660 GLGHVPRLTR IEWGVIRSSL GRPRRFSEQF LIEEKHKLNQ YRESVRSHYA EILAGTKEGL 720 PTDLAQPLIV GQRVIAIHPR TREIHDGSVL TVDHCRYRVQ FDQPDLGVEF VKDIDCMPFH 780 PFENMPTSLL QHNVTSAQIH ENLNEVKLNG KLKQRKVAEH TILSPSDNSD SIKSLYISST 840 MPGSSTLSKK GFTSSSKLQP KVVCGEIGNA QLASSSQPSL LEHVHSKEAD ILAISELARA 900 LDKKEFVLSE LKHMNDGVSE SQKYGDSSVK DSEPFKRNYA SVLKQLTEAN EQVSSALFCL 960 RQRNTYQASS SVMSLKPMAN FDDPGGQASS SNCSACHNQE SIFQSHIAEI VESSRRKART 1020 MVVQATQAMS NLSKVERIED AINFMNNRLS VDDPTASATT LLPADSLTMT SQDQLTASTL 1080 NPLASCQVQD AELNSSSDPN EMKIPSELIS HCLATLLMIQ KCTERQFPPA DVAQVLDSAV 1140 TSLQPLCSKN LPIYGEIQKC MGIIRNQILA LIPT

Sequence ? help Back to Top

Protein Sequence Length: 1174 aa Download sequence

MPPSRKSRSV NKRFSNVREA ASNKDKIAEN ASKNKQKASP GIQKKRKLAD MLGPQWSKEE  60
LELFYEAYRK YGKDWKKVAL AVRNRSVEMV EALYTMNRAY LSLPEGTASV VGLIAMMTDH  120
YSVLGGSDSG KESNDDAEIA KRSQKRLRGK QLNDNKALDG HFSDHSQSHS VASGDGCLSL  180
LKKRHSGIKP HAVRKRTPRV PISYSIGKDN GEKFFSSVRQ SSKQMLDTND VAHKIALALT  240
EASQRGGSSK ISGSPDKKSI PSPGLKSGKR AKSEIAGGKF CNSDLDDGSS ELSLGSTEGD  300
NGDYSRKTIH QSGRGNTGRG RNQEKRIKQY GKNLEPEENL NKHLNDIKEA SSGTDDGKNP  360
SFIKSNFDTD FSYAKNARSS YKGSRKNSKN LQIEKDEGSA FDALKALADL SLMLPITNPY  420
TESSAHLKEG NHDVVDESKM ETHNVFPRIK TTASSKLSKA FSDNGAAVPE AEGEQQLNAG  480
FRKRKQKSFT LKNDETHTGS QLSGSQKTKA ADEVKKSMVK GKRSSVSTAH SRLLKMVKSP  540
GNMSSSTNDK GERDDSSFSP MKVSSTNPVS QVNRGRPRRK MEKPKPMAQQ DSLVCGNIFS  600
SQHNKSITSL EDNSSIHKGK LINCLSSYQT RRWCTFEWFY SAIDYPWFSK REFVEYLDHV  660
GLGHVPRLTR IEWGVIRSSL GRPRRFSEQF LIEEKHKLNQ YRESVRSHYA EILAGTKEGL  720
PTDLAQPLIV GQRVIAIHPR TREIHDGSVL TVDHCRYRVQ FDQPDLGVEF VKDIDCMPFH  780
PFENMPTSLL QHNVTSAQIH ENLNEVKLNG KLKQRKVAEH TILSPSDNSD SIKSLYISST  840
MPGSSTLSKK GFTSSSKLQP KVVCGEIGNA QLASSSQPSL LEHVHSKEAD ILAISELARA  900
LDKKEFVLSE LKHMNDGVSE SQKYGDSSVK DSEPFKRNYA SVLKQLTEAN EQVSSALFCL  960
RQRNTYQASS SVMSLKPMAN FDDPGGQASS SNCSACHNQE SIFQSHIAEI VESSRRKART  1020
MVVQATQAMS NLSKVERIED AINFMNNRLS VDDPTASATT LLPADSLTMT SQDQLTASTL  1080
NPLASCQVQD AELNSSSDPN EMKIPSELIS HCLATLLMIQ KCTERQFPPA DVAQVLDSAV  1140
TSLQPLCSKN LPIYGEIQKC MGIIRNQILA LIPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	482	509	RKRKQKSFTLKNDETHTGSQLSGSQKTK
2	576	580	RPRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein