PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027329952.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 1175aa MW: 129975 Da PI: 9.7174

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027329952.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.1	2.4e-09	55	90	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE el+++a +++G++ Wk++a + +R+ +++ XP_027329952.1 55 QWSKEELELFYEAYRKYGKD-WKKVALAVR-NRSVEMV 90 6***************99.*****.98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1175 aa Download sequence
MPPSRKSRSV NKRFSNVREA ASNKDKIAEN ASKNKQKASP GIQKKRKLAD MLGPQWSKEE 60 LELFYEAYRK YGKDWKKVAL AVRNRSVEMV EALYTMNRAY LSLPEGTASV VGLIAMMTDH 120 YSVLGGSDSG KESNDDAEIA KRSQKRLRGK QLNDNKALDG HFSDHSQSHS VASGDGCLSL 180 LKKRHSGIKP HAVRKRTPRV PISYSIGKDN GEKFFSSVRQ SSKQMLDTND VAHKIALALT 240 EASQRGGSSK ISGSPDKKSI PSPGLKSGKQ RAKSEIAGGK FCNSDLDDGS SELSLGSTEG 300 DNGDYSRKTI HQSGRGNTGR GRNQEKRIKQ YGKNLEPEEN LNKHLNDIKE ASSGTDDGKN 360 PSFIKSNFDT DFSYAKNARS SYKGSRKNSK NLQIEKDEGS AFDALKALAD LSLMLPITNP 420 YTESSAHLKE GNHDVVDESK METHNVFPRI KTTASSKLSK AFSDNGAAVP EAEGEQQLNA 480 GFRKRKQKSF TLKNDETHTG SQLSGSQKTK AADEVKKSMV KGKRSSVSTA HSRLLKMVKS 540 PGNMSSSTND KGERDDSSFS PMKVSSTNPV SQVNRGRPRR KMEKPKPMAQ QDSLVCGNIF 600 SSQHNKSITS LEDNSSIHKG KLINCLSSYQ TRRWCTFEWF YSAIDYPWFS KREFVEYLDH 660 VGLGHVPRLT RIEWGVIRSS LGRPRRFSEQ FLIEEKHKLN QYRESVRSHY AEILAGTKEG 720 LPTDLAQPLI VGQRVIAIHP RTREIHDGSV LTVDHCRYRV QFDQPDLGVE FVKDIDCMPF 780 HPFENMPTSL LQHNVTSAQI HENLNEVKLN GKLKQRKVAE HTILSPSDNS DSIKSLYISS 840 TMPGSSTLSK KGFTSSSKLQ PKVVCGEIGN AQLASSSQPS LLEHVHSKEA DILAISELAR 900 ALDKKEFVLS ELKHMNDGVS ESQKYGDSSV KDSEPFKRNY ASVLKQLTEA NEQVSSALFC 960 LRQRNTYQAS SSVMSLKPMA NFDDPGGQAS SSNCSACHNQ ESIFQSHIAE IVESSRRKAR 1020 TMVVQATQAM SNLSKVERIE DAINFMNNRL SVDDPTASAT TLLPADSLTM TSQDQLTAST 1080 LNPLASCQVQ DAELNSSSDP NEMKIPSELI SHCLATLLMI QKCTERQFPP ADVAQVLDSA 1140 VTSLQPLCSK NLPIYGEIQK CMGIIRNQIL ALIPT

Sequence ? help Back to Top

Protein Sequence Length: 1175 aa Download sequence

MPPSRKSRSV NKRFSNVREA ASNKDKIAEN ASKNKQKASP GIQKKRKLAD MLGPQWSKEE  60
LELFYEAYRK YGKDWKKVAL AVRNRSVEMV EALYTMNRAY LSLPEGTASV VGLIAMMTDH  120
YSVLGGSDSG KESNDDAEIA KRSQKRLRGK QLNDNKALDG HFSDHSQSHS VASGDGCLSL  180
LKKRHSGIKP HAVRKRTPRV PISYSIGKDN GEKFFSSVRQ SSKQMLDTND VAHKIALALT  240
EASQRGGSSK ISGSPDKKSI PSPGLKSGKQ RAKSEIAGGK FCNSDLDDGS SELSLGSTEG  300
DNGDYSRKTI HQSGRGNTGR GRNQEKRIKQ YGKNLEPEEN LNKHLNDIKE ASSGTDDGKN  360
PSFIKSNFDT DFSYAKNARS SYKGSRKNSK NLQIEKDEGS AFDALKALAD LSLMLPITNP  420
YTESSAHLKE GNHDVVDESK METHNVFPRI KTTASSKLSK AFSDNGAAVP EAEGEQQLNA  480
GFRKRKQKSF TLKNDETHTG SQLSGSQKTK AADEVKKSMV KGKRSSVSTA HSRLLKMVKS  540
PGNMSSSTND KGERDDSSFS PMKVSSTNPV SQVNRGRPRR KMEKPKPMAQ QDSLVCGNIF  600
SSQHNKSITS LEDNSSIHKG KLINCLSSYQ TRRWCTFEWF YSAIDYPWFS KREFVEYLDH  660
VGLGHVPRLT RIEWGVIRSS LGRPRRFSEQ FLIEEKHKLN QYRESVRSHY AEILAGTKEG  720
LPTDLAQPLI VGQRVIAIHP RTREIHDGSV LTVDHCRYRV QFDQPDLGVE FVKDIDCMPF  780
HPFENMPTSL LQHNVTSAQI HENLNEVKLN GKLKQRKVAE HTILSPSDNS DSIKSLYISS  840
TMPGSSTLSK KGFTSSSKLQ PKVVCGEIGN AQLASSSQPS LLEHVHSKEA DILAISELAR  900
ALDKKEFVLS ELKHMNDGVS ESQKYGDSSV KDSEPFKRNY ASVLKQLTEA NEQVSSALFC  960
LRQRNTYQAS SSVMSLKPMA NFDDPGGQAS SSNCSACHNQ ESIFQSHIAE IVESSRRKAR  1020
TMVVQATQAM SNLSKVERIE DAINFMNNRL SVDDPTASAT TLLPADSLTM TSQDQLTAST  1080
LNPLASCQVQ DAELNSSSDP NEMKIPSELI SHCLATLLMI QKCTERQFPP ADVAQVLDSA  1140
VTSLQPLCSK NLPIYGEIQK CMGIIRNQIL ALIPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	483	510	RKRKQKSFTLKNDETHTGSQLSGSQKTK
2	577	581	RPRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein