PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027177155.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | Nin-like | ||||||||
Protein Properties | Length: 802aa MW: 90839.1 Da PI: 5.0835 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 59.2 | 7.6e-19 | 641 | 688 | 5 | 52 |
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 i+ e+l+++ +++dAAk++gv+ ++LKriCR+yGI+RWP Rk +++ XP_027177155.1 641 ITHEVLEQNSMRKLEDAAKNIGVSRSTLKRICREYGIHRWPPRKERKV 688 899*****************************************7775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 802 aa Download sequence |
MAMEAQTFPS PPFSTEGLGP CELSYSHSFN NSFHQWTFWS TCGNDEGRCG KPHHLSAAAD 60 AAVIKTDIKW FMQLDTETIM WWRCLVQFWG LVRIGDKTYL TTCDQPFALC YYFDPDVKPL 120 CEYRKLCLEC LIPVDDDDDD DDDDDDDELI IGPPGRVFRS GIPEHAEDVH DYTSREYPQR 180 DYAVDRARYY WALPIYHPTR HLPVGVLEIV SPYVVGDLPR RQVLEKLQNL LQKVNLTTTC 240 VRLAEASSCE YLKYFFCLFL YCITLAEALG YPFLLILLSH SSIGQDGEIA KIDKALRNTK 300 SIFKRPKHGL YYPETWTTSG EILSSREGVD FIRKGQGVVG RAFSSKSACF CRDIRQLSIT 360 DYPLLLKARF LGYSSCFAVC LQSSCSNNCI YVLEFFLPTN EKDYGDCRIM LNSIMEKLKK 420 YLRSSFKIAL GQELGQKLTV EVIKVTPEDE FDSFEICSTA GIESTPRLGK VQGGEGMMQL 480 DFSSQQVDAA NGSMNGGVES TPRLAKAHGG EGMMQVDFSS QQVDAANGYI KGVHGQQSGI 540 VRSPPRPEHA QDFVNISYQE LNLAGVDVAH NSMNGIYEQQ DGIVRSSIGQ VLMQNMVSIA 600 DYEPIVEDPE RDDASIEQSG NEVTNLKMQE PSCTLKSDLG ITHEVLEQNS MRKLEDAAKN 660 IGVSRSTLKR ICREYGIHRW PPRKERKVNQ VFAKQKVVQP AIENVEEHHW LDATRLEDDS 720 SMWMIKAKYQ EDKIKFELSS SARKIDLENN IAQRFNLSGG SFKIMYQDEL NDWILITCDT 780 DLSFCMKTLH KLGRTTIEVL VS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24020.1 | 6e-35 | Nin-like family protein |