PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027175810.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

HSF

Protein Properties

Length: 379aa MW: 43434.1 Da PI: 6.4438

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027175810.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	109.9	1.8e-34	75	167	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Flkk++e+++d e++++isws++++sfvv+d+++f++++Lpk+Fkh+nf+SFvRQLn+Y F+k+++++ weF++++F+kgkk+ll++ XP_027175810.1 75 FLKKTFEMVDDLETDSTISWSSTNTSFVVWDPHKFSRDLLPKHFKHNNFSSFVRQLNTYRFRKIDSDR---------WEFANEEFQKGKKHLLKN 160 9**************************************************************999.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 ikr+k++ XP_027175810.1 161 IKRRKQH 167 **986 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MDQLNVGFKR SMPVEEEDAP KVEKAEILTV KEEPVVFLDE DGPFGNVSSN FSGGGEFSDV 60 PKPLQGLHEV GPPPFLKKTF EMVDDLETDS TISWSSTNTS FVVWDPHKFS RDLLPKHFKH 120 NNFSSFVRQL NTYRFRKIDS DRWEFANEEF QKGKKHLLKN IKRRKQHSQM LQHQGAGQPW 180 LDSAKYISET ELQKLRNDQN TLKLELLRLK QQQVNTENYL AAVKERLRTA ESKQKYMAIF 240 MVKAFKNPLF VQLFIEKMKQ KRALGSGEVS KKRRLAGPQG NENLTEAMNA ANNSLDATRK 300 VVDGKNLQPQ DELTTVDPEI QILFSPDHES SGPLQEQLVR ASSNTSENFI LWEKLMEDDM 360 IYENEPETGH ASYPAGLMA

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MDQLNVGFKR SMPVEEEDAP KVEKAEILTV KEEPVVFLDE DGPFGNVSSN FSGGGEFSDV  60
PKPLQGLHEV GPPPFLKKTF EMVDDLETDS TISWSSTNTS FVVWDPHKFS RDLLPKHFKH  120
NNFSSFVRQL NTYRFRKIDS DRWEFANEEF QKGKKHLLKN IKRRKQHSQM LQHQGAGQPW  180
LDSAKYISET ELQKLRNDQN TLKLELLRLK QQQVNTENYL AAVKERLRTA ESKQKYMAIF  240
MVKAFKNPLF VQLFIEKMKQ KRALGSGEVS KKRRLAGPQG NENLTEAMNA ANNSLDATRK  300
VVDGKNLQPQ DELTTVDPEI QILFSPDHES SGPLQEQLVR ASSNTSENFI LWEKLMEDDM  360
IYENEPETGH ASYPAGLMA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	158	164	LKNIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	2e-71	HSF family protein