PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027172708.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 315aa MW: 35883.8 Da PI: 7.6501

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027172708.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.7	5.6e-50	12	137	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhP+deel+++yL k+v+ + + + evd++k+ePwd+p+++ + ke+yf+s+rd+kyatg r+nrat sgyWkatgkd++vl+ XP_027172708.1 12 LPPGFRFHPRDEELICDYLMKRVACCDQPP--LMIEVDLNKCEPWDIPENACVGGKEYYFYSQRDRKYATGLRTNRATLSGYWKATGKDRPVLR- 103 79*******************9988666..6899********7777789**********************************9. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 kg+lvg++ktLvfy+grapkg+ktdWvmhe+rle XP_027172708.1 104 KGTLVGMRKTLVFYQGRAPKGRKTDWVMHEFRLE 137 999**************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MMMNLSMVEA KLPPGFRFHP RDEELICDYL MKRVACCDQP PLMIEVDLNK CEPWDIPENA 60 CVGGKEYYFY SQRDRKYATG LRTNRATLSG YWKATGKDRP VLRKGTLVGM RKTLVFYQGR 120 APKGRKTDWV MHEFRLEGPF GPPKLSSLKE DWVLCRVFFK NRDNNIIAAK QDMDMNSYDG 180 ETSPSPLPPL MDPYFKFGQT QTNTNEHEQV PCFSIFSSDQ ANNNSQPFSY LTHMDLPNFS 240 TKNMPTFNFG GIPDFGAYFS SSCCEQKVIK AVLNQLTKLE NASPNVKGSP SFGEASTSDS 300 FLSEVALSTM WNNQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	1e-113	NAC family protein