PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027169201.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Nin-like

Protein Properties

Length: 398aa MW: 44719.6 Da PI: 6.6201

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027169201.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	37.5	4.8e-12	228	256	18	46
RWP-RK 18 ikdAAkeLgvclTvLKriCRqyGIkRWPh 46 + + A ++ v++++LKr+CR++GI+RWP+ XP_027169201.1 228 LVSTAESIRVSPSTLKRKCRKFGIPRWPR 256 56789***********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MAEVRTRSPN DVDDVDGTFG KSEFLDYIGT VLHMSVSTSH KSFRVFWNEE DDESDSHQTL 60 FSQVGPPLLR PPIVKDKITI ALQHVDLLYN GAMLAQFWMP VMIGGRRFLK CSDQPFGLTY 120 LRKGLCSYRK LCLKCYYCTN NTCSSSDGGA DYVDVDWNGR GVRESVLLTG PPSRVFRRGL 180 PEYSPNVEFS VDSEYPLRDE AMGRKISDYM AVPVFDPNSG ECIGVIELVS TAESIRVSPS 240 TLKRKCRKFG IPRWPRKGNQ GTCSATSTES NKNREIPNAE YGQEVSHPNV SSQEGTTSSK 300 HNSSQAATIA KDSFMMIKAA YGEIKKIKFQ LRFSSRLVDM EMEAASRLKL KVGDFKFWYL 360 DEDDDWILIT CDADLRTMES MGKNTIKVSI THSDDAPS

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MAEVRTRSPN DVDDVDGTFG KSEFLDYIGT VLHMSVSTSH KSFRVFWNEE DDESDSHQTL  60
FSQVGPPLLR PPIVKDKITI ALQHVDLLYN GAMLAQFWMP VMIGGRRFLK CSDQPFGLTY  120
LRKGLCSYRK LCLKCYYCTN NTCSSSDGGA DYVDVDWNGR GVRESVLLTG PPSRVFRRGL  180
PEYSPNVEFS VDSEYPLRDE AMGRKISDYM AVPVFDPNSG ECIGVIELVS TAESIRVSPS  240
TLKRKCRKFG IPRWPRKGNQ GTCSATSTES NKNREIPNAE YGQEVSHPNV SSQEGTTSSK  300
HNSSQAATIA KDSFMMIKAA YGEIKKIKFQ LRFSSRLVDM EMEAASRLKL KVGDFKFWYL  360
DEDDDWILIT CDADLRTMES MGKNTIKVSI THSDDAPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	2e-22	Nin-like family protein