PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027168394.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 739aa MW: 85783.9 Da PI: 5.1405 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 70.9 | 3e-22 | 132 | 216 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Yn YAke+GF +r+++s ++++++e + ++C++eg+++ ++ + ++r+etrtgC a++++++ ++++w+v++++ eHnH++ XP_027168394.1 132 NYYNCYAKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTMKEAS-----SRRKETRTGCLAMIRLRLVESNRWRVDEVKIEHNHPFD 216 69****************************************98877.....8999*******************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 739 aa Download sequence |
MEGSSEDGEQ LHQDEGSEQE IDGEEVFGFE STDLGDDTNQ VLAIEHVDIA NTADQMLGIN 60 RDDLENDMQV LDFERNGHDH NSEQMLEIQC GNLDNGIDRD TVIDDQNLVS GAKDYLPPVV 120 GMEFESYDDA YNYYNCYAKE LGFAIRVKSS WTKRNSKEKR GAVLCCNCEG FKTMKEASSR 180 RKETRTGCLA MIRLRLVESN RWRVDEVKIE HNHPFDPERV QNCKSHKKMD PGSKRKLEPS 240 VDVEVRTIKL YRTPVIDTVG NRSSNERESG NQVDQSKHLK LHQGEAEYIS NFFGRLQLTN 300 PNFFYVMDLN DEGHLRNVLW IDSRSRAAYG YFGDVVAIDT TCLSKSYNIP LLLFVGVDHH 360 LQSILLACGF LVDETMETYI WLLRAWLSCM SGRPPQTVLT DRCKALQSAI SEVFPRTHHH 420 LYLPLVMQSI LDKLEVGASK VFQDVLNRTV YNSLKADEFE MAWEEMIQHF GLRDHKWLQT 480 YYEERERWAP VYLKDTFFAG LVTFPPGDCM SPFFDGYVNS QTTLKEFFNI YELVLQKKHQ 540 KEALDDLESR KYIPVLRTRC NYEVQLSEVY TKEIFLKFQV ELELMSNCFN VTQIHANGPI 600 ITYVIKERDA EGDMNNARNF EVMYDKVGLE VRCICSCFNF RGYLCRHALQ ILTYNGIEDI 660 PSQYILSRWR KDFKRLYAPD IGSNVIDVTN PVQWFDHLYR RAMQVVEEGM TSQDHYTVAW 720 QAFKESLNKV RLVADRHVQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80010.1 | 0.0 | FAR1 family protein |