PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027153775.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family Dof
Protein Properties Length: 242aa    MW: 25005.8 Da    PI: 8.4918
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027153775.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.51.4e-382685362
          zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                     ++l+cprC+stntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++PvGgg+rkn k+s
  XP_027153775.1 26 PEQLQCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRS 85
                    6899****************************************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MPSADSSERR GTKANQVGSG APPSEPEQLQ CPRCESTNTK FCYYNNYNFS QPRHFCKSCR  60
RYWTHGGTLR DIPVGGGSRK NAKRSRTVAS AAASSAFSFS SSASTYEHRH TQATTSQLLT  120
PLGVDHGGAV PLISDAKSGV NACGSFTSLL NTQGPGFFAL GGFGVGLGAG VEDMGFGLAR  180
AVWPFPGLGV GEGGPTGVGG PSVLGSTWQL QSGEAGIVGG DCFTLSDVAI STAGHGMKRD  240
VF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50410.13e-49Dof family protein