PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027152872.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | TCP | ||||||||
Protein Properties | Length: 349aa MW: 36516.7 Da PI: 8.8912 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 123.8 | 1.9e-38 | 72 | 146 | 2 | 76 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceae 76 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as+ a+ XP_027152872.1 72 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAA 146 789******************************************************************776222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence |
MDPKGSKPQP PQDAVGLPSF LNANHNNSSI MSETNHNNSP TPPPAEIKDF RICIADKQEN 60 TTTSAKKPHQ LAPKRSSNKD RHTKVEGRGR RIRMPALCAA RIFQLTRELG HKSDGETIQW 120 LLQQAEPSII AATGTGTIPA SALAAAAAGA GGSVSMSAGL HPPKISAELG AHHPPHMDIA 180 GSGQGAGSTS ASRTNWPMVG GSLLRAPHMG MPTTTAGIWP PTSASGAVSG FGFQSSSSPA 240 PAATSLGTEC SNYLHKLGFP GFDLPAATNN MGPMSFTSIL GAATDQQQQL PGLELGLSQD 300 GHVGVLNPQT LSQIYQHMGQ ARAHQQQRQH QDQQQQQPSP NDNSQGSGQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27010.1 | 1e-55 | TCP family protein |