PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027149276.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Dof

Protein Properties

Length: 269aa MW: 27372.2 Da PI: 7.4428

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027149276.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.2	2e-39	23	82	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++l+cprCdstntkfCyynny+lsqPr+fCk+CrryWt+GG+lrnvPvGgg+rk+ +ss XP_027149276.1 23 PEHLPCPRCDSTNTKFCYYNNYNLSQPRHFCKSCRRYWTRGGTLRNVPVGGGSRKSSSSS 82 57899**************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MSSETGDPRP ARLSTMATRP SEPEHLPCPR CDSTNTKFCY YNNYNLSQPR HFCKSCRRYW 60 TRGGTLRNVP VGGGSRKSSS SSSSSSSSSN KRPRTTSGTN SPTATTPTAS SSSDSMAQAH 120 HHEPPLHANP VAMLPQMGLM GCEVNLNEAV PEASSFSTLL TTTPGNMFPF GGGYGLGPGL 180 HGLGFGLGGM DWPMESVVAG QGNGGGVGGA GVGVGGGDGI SDGSGAGGSS SSGCNNTWQM 240 GSGVEGGLAE GDCFGWPDLA ISMPGKGLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50410.1	4e-32	Dof family protein