PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027127660.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 679aa MW: 73146.7 Da PI: 6.7136 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 104.4 | 6.2e-33 | 265 | 322 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers+ +++++ei+Y+g Hnh+k XP_027127660.1 265 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSQ-EGHITEIIYKGAHNHPK 322 8****************************************.***************85 PP | |||||||
2 | WRKY | 103.8 | 9.2e-33 | 474 | 532 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k v++tYeg+Hnh+ XP_027127660.1 474 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHDLKSVITTYEGKHNHD 532 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 679 aa Download sequence |
MGPVEHSASA SSDQKDGSQG GAAVDQTGKF SSMSEQRMSS RGGLMERMAA RAGFNAPRLN 60 TESIRPPDLS QNLEVRSPYL TIPPGLSPTT LLDSPVFLTN SLVQPSPTTG KLGFLMSGSS 120 RNATVTEFPD KSKENCFQNV NTSSFAFRPI LESGPPLFFG ASNRITSTNL PQQPFPSIEV 180 SVQSGNTLPP RSVEHAKSAA LNQPADFSRP SAAKDTVHND ILSEPSSFQN VGGGSEHSPP 240 LDEQQEDDAD QRGGGDQNIS GAPAEDGYNW RKYGQKQVKG SEYPRSYYKC THPNCPVKKK 300 VERSQEGHIT EIIYKGAHNH PKPPPNRRSA LGSSNTLSDL LVENSEQVAM GADGNPGWTT 360 MQKGNFDWRH DNLEETSSAA LGPEYGNGTT SLQAQNGSQL ESGDGVDGSS TFSNDEDDED 420 RGTHGSVSLG YDEGDESESK RRKIESYATD MSGATRAIRE PRVVVQTTSE VDILDDGYRW 480 RKYGQKVVKG NPNPRSYYKC TSAGCTVRKH VERASHDLKS VITTYEGKHN HDVPAARNSS 540 HVNSGISGTL PAQAGAAVQS HVHRPEPSQL HNCIAQFERP PLGSFALPGR PPLGPTHGFG 600 FGMNQQGLPN MTLAGLGPPN QGKIPALPVH PYLGQPRPMN EMGRMLPKGE PKMEPMSDPG 660 LNLSNGSSVY HMSRLPLGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56270.1 | 0.0 | WRKY family protein |