PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027127570.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB | ||||||||
Protein Properties | Length: 170aa MW: 19665.3 Da PI: 10.0386 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.1 | 2.4e-19 | 5 | 52 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde+l+++v+++G g+W tI ++ g+gRt k+c++rw ++l XP_027127570.1 5 KGPWSAEEDERLKKCVEEHGIGNWITIEKYSGLGRTSKSCRLRWTNHL 52 79*******************************************996 PP | |||||||
2 | Myb_DNA-binding | 50.7 | 4e-16 | 58 | 100 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +g++T++E+ l v+++k++G++ W+ I+++++ gRt++++k++w+ XP_027127570.1 58 KGSFTKQEERLVVKLHKKYGNK-WSYISSKLP-GRTDNEIKNFWH 100 799*******************.*********.***********7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MVVKKGPWSA EEDERLKKCV EEHGIGNWIT IEKYSGLGRT SKSCRLRWTN HLRPNLKKGS 60 FTKQEERLVV KLHKKYGNKW SYISSKLPGR TDNEIKNFWH GRVRRCRRKF LPIYPEDIED 120 GGSRGDGLDT DGKNNINDND HNSSAKNVME CIKSRAPFSP NSNICLETYP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26930.1 | 5e-49 | MYB family protein |