PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027127132.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 130aa MW: 14504 Da PI: 5.9846 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.1 | 1e-18 | 19 | 69 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +g+++AeIrd ++ng +r +lg+f taeeAa+a+++a+ + +g XP_027127132.1 19 RFRGVRKRP-WGKYAAEIRDMNNNG--ARLWLGTFATAEEAARAYDRAAFATRG 69 69*******.**********65555..**********************98877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 130 aa Download sequence |
MADQRGGNKS KDDKEGEVRF RGVRKRPWGK YAAEIRDMNN NGARLWLGTF ATAEEAARAY 60 DRAAFATRGS LAVLNFPEEY PSSSSLPSSS SSSSSHVNPN VGREVIEFEY LDDKVLEDLL 120 QVEENKTTKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 8e-27 | ERF family protein |