PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027127073.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | HB-other | ||||||||
Protein Properties | Length: 605aa MW: 63486 Da PI: 6.2013 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 18.7 | 3e-06 | 14 | 75 | 7 | 55 |
--HHHHHHHHHHHH...HSSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHH CS Homeobox 7 ftkeqleeLeelFe...knrypsaeereeLAkkl..........gLterqVkvWFqNrRake 55 f++ ++ e+e+ + ++ ps+e LA+k ++ +qV +WFqNrR+ XP_027127073.1 14 FNPAEVAEMEAILQahnNTAVPSREILLALAEKFsnspersgkvVVQMKQVWNWFQNRRYAL 75 6777777777766643357789999999999999999999999999*************965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 605 aa Download sequence |
MGRPPSNGGP SFRFNPAEVA EMEAILQAHN NTAVPSREIL LALAEKFSNS PERSGKVVVQ 60 MKQVWNWFQN RRYALRAKAT KVPAKVGPSP VPRDDLAAAR NVPQAPQHIS VPPAIVRNVP 120 QVSQPVSAPS VQSAGKNGSD NSQMEFEAKS ARDGAWYDVA TFISHRSVET SDPEVLVRFA 180 GFGPEEDEWV NVRKHVRQRS LPCESSECVA VLPGDLILCF QEGKEQALYF DAHVLDAQRR 240 RHDVRGCRCR FLVRYDHDQT EEIVPLRKVC RRPETDYRLQ QLHAESANWN QNKAGSEPHT 300 GNTLKVSLPA EATQKQHKAE APAEVKEQQH NTEGRANTGP AATPISVDNL STITAAVSRA 360 HANITSAAVF APVAHVTAPV VTTTAPIAQS NVPGATMPVA NNTSPVSHSS VSKATVSTDN 420 ATAPVTYSNV SGASVSTTTP VANSSVSGSS SSGMSTTVPV DNSDDSRATI STAAPVATSH 480 VSGATSSVVT TTTLGDNSNV FGANTMDSAT NSNDTVDANP VTSTTSPIAD SNFSGAPGVA 540 PIGHSGVLPD TEPKGLPENV SGAGASNSVE NTSTPLATIA VTSSTTDTAT TGAVEGSSDE 600 NTLQG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18380.1 | 1e-128 | HB-other family protein |