PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027126393.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 745aa MW: 86214.1 Da PI: 7.2988 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 82.1 | 9.6e-26 | 29 | 114 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 Y+eYAk+vGF + k +s++s+ ++e+++++f C ++g++++++++ ++r++ ++gCka+++vk++ +gkw+++++++eHnH+l p XP_027126393.1 29 LYKEYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDA----INPRPSPKIGCKASMHVKRRPNGKWYIHSFVKEHNHDLLP 114 7***************************************999877....9************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 745 aa Download sequence |
MESSSAPVNS NFEPREDVEF DSHEAAYELY KEYAKSVGFG TAKLSSRRSR ASKEFIDAKF 60 SCIRYGNKQQ SDDAINPRPS PKIGCKASMH VKRRPNGKWY IHSFVKEHNH DLLPAQAHFF 120 RSHRNVDPLK NDSKVRRRKI LASMTKQYGV YQPSGPVENF IRNQHDRGRS LTLEEGDGQG 180 LLDFFMHMQE ENPRFFYAVD FNEEHRLRNV FWVDAKGIDD YAYFSDVVLF DTTYFSNKYK 240 LPLVLFIGVN HHIQPILLGC ALIADETVFT FAWLMQTWCL AMGGHGPQVL LTDQNHSMKA 300 AVAAVFPDTR HYFSLWQALD KIPRQPQYLN LWHETFLAKF RKCIHKSWTE EQFEKRWWKL 360 VERFNLRDDQ WMHSLYENRR LWVPTFMRDF SFSGLSVASR SESPSSFFDK YVLAETSLKE 420 FVRQYQLVLE DRYEEEAKAN FDAWHETPEL KSPSPFEKQM SLVYTHEIFK KFQVEVLGAA 480 ACHLKKEKED ESSITYAVKD FENNEDFMVE WSEQKSEIYC SCRSFQYRGY LCRHAIVVLQ 540 MSGVFTIPSK YILQRWTNAA TSRHSISERL DEVQNKVRRY NDLCRRAIIL GEEGSLSQES 600 YNIAVGAIRE AQRQCTSVSN SADNNLRTGT STALAIHGTE EANQGDIAMD VGEVRGNMVT 660 RTNKSSKRAH SGKERESEVS NSNRKGKVAM EPEAANVGSH GDFHSVDMPS GLEYPAMYPR 720 FLTTLLRSGD MSKRSVEMLG EMLEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76320.1 | 0.0 | FAR1 family protein |