PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027126013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | HSF | ||||||||
Protein Properties | Length: 359aa MW: 41035 Da PI: 7.9142 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 96.8 | 2.1e-30 | 52 | 143 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+++++ed+e++++isws n++sf ++d+ +f+ ++Lpk Fkhsn+aSFv QLn YgF+k+ +e+ e+++++F++gk++ l++ XP_027126013.1 52 FLRKTFDMVEDPETNSIISWSPNNRSFTIWDHIKFSVELLPKNFKHSNLASFVSQLNNYGFRKICTEK---------YEYENPWFQAGKRHWLKH 137 9****************************************************************999.........78**************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 ikr+++ XP_027126013.1 138 IKRRNR 143 ***986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 359 aa Download sequence |
MEGKKRKAID DTGGDNGGDN GDGGGASGYG GNTRDIGQLP RRPRTGSILP HFLRKTFDMV 60 EDPETNSIIS WSPNNRSFTI WDHIKFSVEL LPKNFKHSNL ASFVSQLNNY GFRKICTEKY 120 EYENPWFQAG KRHWLKHIKR RNRQCEHDSV IQSSCGSTDN LLKGRLEDQL ETLMIEHHGL 180 KVKVEKLSEK LGNHFNKIKE IQKLIEKRKM SKYEANKNQE LDNSTSEEIS LELVAEGNCS 240 RHTNKDEQVQ EEVMVIQKEG KNFCSPDNTG GSNQEKKATA TSETFENRDF RKKMIEDDSE 300 HENGGHEELE ESHPEAILKL LDLNACNTLV QDLNAQVQTK KRKVLQLQKL LKILTSGRK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 135 | 141 | LKHIKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17750.1 | 7e-34 | HSF family protein |