PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027125614.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB_related | ||||||||
Protein Properties | Length: 575aa MW: 63832.9 Da PI: 6.5247 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.5 | 1.5e-08 | 457 | 505 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +W+ E +lv++v+++G g+W+ I r Rt ++k++w+++l XP_027125614.1 457 PWSLTEVVKLVEGVARYGAGRWSEIKRLAFasySYRTSVDLKDKWRNLL 505 8****************************99**99************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 575 aa Download sequence |
METVVSMEVN EEAKVEDGIA KETGSEPVSL KHISDPDPDP EPDPVVYKLV RVDGEGRLVP 60 ATDEEVLVVE DLLEDEKPEH CAAECEQPIE CIKTEGCSLQ KNHVQSSEGI SSVQLDAAVD 120 LGKKIIQPEE IPCQMASASA GNSISQPMSA VGCPGSEGGL VENWSSRTDL ATTGKPDFSK 180 LKGEICLDNL TVKELQETFR ATFGRETFVK DKRWLKRRIS MGLTNSCDFS TTAFMIKDNE 240 VLKKDKKENR KKSAVYKDLV VGVASETAGS PTNGLNRLAD SNPNFDDRKT ESLLLEHDSV 300 REDPSLEQRT AKRVRKPTKR YIEEMSEEES RGSSGRLVSV VKSFEHSQSC SKACTMPVQN 360 VRLAGRPMVT RQDSLGGSGV QVPYVSRVRK GRPRENFMPF MIAAASENDN HHLERKEVEL 420 EKYVELKRMD SFEDNSDDNM GSVPASSGGM RRKHHRPWSL TEVVKLVEGV ARYGAGRWSE 480 IKRLAFASYS YRTSVDLKDK WRNLLRASFS QLPAEKGMHN ARKHASIPIP APILLRVREL 540 AEMQAQVPAN FSSSKFTGQS GGSDRSVHET RSGYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72650.1 | 1e-97 | MYB_related family protein |