PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027125307.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 270aa    MW: 30170.8 Da    PI: 7.1867
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027125307.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.44.8e-1571119355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + GVr+++ +grWvAeI+d s   ++ r +lg+f+ aeeAa a+++a + l+g
  XP_027125307.1  71 FLGVRQRP-SGRWVAEIKDSS---QKLRLWLGTFDRAEEAALAYDNASRLLRG 119
                     67******.7*********42...36*********************998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MINQQILKPI SMDGSMDAQS SKVQSQSQDP FTSLPLLPMM ATATPPESIE VQVDMESPRR  60
ENITIHGRRR FLGVRQRPSG RWVAEIKDSS QKLRLWLGTF DRAEEAALAY DNASRLLRGR  120
NAKTNFTYNG TMDTREENLS LLGKDPRLYQ LLKHAITKNL AKSSALDSSK STRNFTDQSV  180
VEGESSPVDH VVTTVEDNII GNEDHDQSQE KRELRGISLG SSKVYSSVIV APSFSASLSQ  240
GREEPENNSQ GTLFNSLFYQ TNVMSHHKLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-25ERF family protein