PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027125006.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 250aa    MW: 28216.9 Da    PI: 8.5598
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027125006.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM151.53.9e-47141381128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF+Ptdee+v +yL +k+ + +l++ ++i+e++++k++PwdLp  +   e++ yfFs+++ ky++g+r+nrat++gyWkatg dk+++s+
  XP_027125006.1  14 LPPGFRFQPTDEEIVFQYLLRKTFSCPLPA-SIIPEINVCKHDPWDLPGDL---EQDRYFFSNKEAKYPNGNRTNRATDTGYWKATGVDKQIVSS 104
                     79****************************.89***************543...5689***********************************98 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++ l gl+ktLvf+kg++p+g++tdW+mheyrl
  XP_027125006.1 105 rRKPLLGLRKTLVFHKGKSPHGSRTDWIMHEYRL 138
                     455669**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MGCLNFVKDG VIRLPPGFRF QPTDEEIVFQ YLLRKTFSCP LPASIIPEIN VCKHDPWDLP  60
GDLEQDRYFF SNKEAKYPNG NRTNRATDTG YWKATGVDKQ IVSSRRKPLL GLRKTLVFHK  120
GKSPHGSRTD WIMHEYRLIL TGKTACCSQQ TAKSSQSSSV QLGNWVLCHI FLKKGSTKAV  180
DETVQVCKNY KNIAEQNVRM DQHRFENFTI GNLSEVASTS SSSSFFSDPS VLTEVSSSQC  240
DYEETSSPIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-78NAC family protein