PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027124647.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 326aa    MW: 36599 Da    PI: 7.6142
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027124647.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM180.64e-5651311129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeel+++yL +kv++  ++  ++i++vd++k+ePwdLp+k++ +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke+++ 
  XP_027124647.1   5 LPPGFRFHPTDEELITYYLSNKVSDFGFTS-KAITDVDLNKSEPWDLPAKASMGEKEWYFFSLRDRKYPTGMRTNRATEAGYWKTTGKDKEIFR- 97 
                     79*************************999.88***************999999****************************************. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrle 129
                     +g lvg+kktLvfy+grapkgekt+Wvmheyrle
  XP_027124647.1  98 GGVLVGMKKTLVFYRGRAPKGEKTNWVMHEYRLE 131
                     ********************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MEENLPPGFR FHPTDEELIT YYLSNKVSDF GFTSKAITDV DLNKSEPWDL PAKASMGEKE  60
WYFFSLRDRK YPTGMRTNRA TEAGYWKTTG KDKEIFRGGV LVGMKKTLVF YRGRAPKGEK  120
TNWVMHEYRL ETKLAFKTSK EEWVVCRVFQ KSATVKKPQA APSSPQSLES PCDTNTFANE  180
LGDIELPNFS TLAVNSANGI FSNISPQTFS TDNLNNAINW AAIRDAANAL PSLSSWPSPS  240
LLSTANLAMS APLLLRALQM RNYQPREATT ASTDYSFMPQ GMISNQFGND FSSHLAASSS  300
SNRVLDHHSV QQQSQEQPFN LDSNIW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.11e-109NAC family protein