PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027124383.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 822aa MW: 95441.5 Da PI: 8.5975

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027124383.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.6	2e-23	62	152	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn Y+k +GF ++k+ k s ++g++ r+f Cs+egkr+e+ + +++ r++r+etrtgC a+l++k +k ++k++v+++++eHnH++a XP_027124383.1 62 EFYNLYGKLTGFGIKKADVKIS-QDGTVQYRKFACSREGKRHERYYNlAQRIRQPRPETRTGCLACLRIKHDKaSEKYVVMNFVKEHNHKMA 152 6**************99998.7888*************9997888999***************9*************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 822 aa Download sequence
MDREKGKNAV INLNEEDENC ESFSSSEEEF ISSETIEKNY PVDDMDEEVM NMVFDSEEDA 60 YEFYNLYGKL TGFGIKKADV KISQDGTVQY RKFACSREGK RHERYYNLAQ RIRQPRPETR 120 TGCLACLRIK HDKASEKYVV MNFVKEHNHK MASKSSIPYL WSHRHVTDAD YAQVRTMKMA 180 GVKTSQVMKF FAMQCGRYGN VGFVLKDLYN RVDKERRVLI EAGDAKNAIA YFNGRKASDK 240 SFIFEYDVDE ESRLKTLFWA DYESQLDYKC FGDVLLFDST YNVNEYHKPL VVFSGVNNHY 300 NTVVFGTALV SGERVEEYEW LLHTLTKVMG GRKPKAVITD GDKAMRRAIN NVFPDARHRL 360 CIWHLMKIAD AKAKSNVFKS MFGRMMKKAY PIGDLEEEWF AVVGKCGLRQ NKWVEKIFEM 420 RLLWAESLLR DTFFAGMRST QRCEQMNAFL KQYLKKNMRF YESVIIHELA LTHLRHTGAK 480 AVYETEDTIV VLAIALQKLE KHASEVYTRN VFFRVKKHLN RQGLYDCYER KETWNGCIFF 540 LKKYADDRTW TVELNRRTLS LKCSCKKMEW KGLPCAHMFR VMLMENMQSI PKSCILKRWT 600 CEAREEADNE VLEGRQEIYA ELVQTARFGT MTSICKEMCF FASHMDDGFA RVRDIVIKET 660 NNWRRAWVER GFDCGTNGRL AADSKESRLS QYYVKDPERT RAKGDRLCDG HNKRTCPHNL 720 LSYDACGISG SQAIHYSNPG SRTMGDSRFQ FGASSSGDFQ GVQHPFLSHS GMLNRVDRDG 780 SSSQKIDHSQ SHTMQSPWSE WNGTGSYTIV DRNSYSASFW KS

Sequence ? help Back to Top

Protein Sequence Length: 822 aa Download sequence

MDREKGKNAV INLNEEDENC ESFSSSEEEF ISSETIEKNY PVDDMDEEVM NMVFDSEEDA  60
YEFYNLYGKL TGFGIKKADV KISQDGTVQY RKFACSREGK RHERYYNLAQ RIRQPRPETR  120
TGCLACLRIK HDKASEKYVV MNFVKEHNHK MASKSSIPYL WSHRHVTDAD YAQVRTMKMA  180
GVKTSQVMKF FAMQCGRYGN VGFVLKDLYN RVDKERRVLI EAGDAKNAIA YFNGRKASDK  240
SFIFEYDVDE ESRLKTLFWA DYESQLDYKC FGDVLLFDST YNVNEYHKPL VVFSGVNNHY  300
NTVVFGTALV SGERVEEYEW LLHTLTKVMG GRKPKAVITD GDKAMRRAIN NVFPDARHRL  360
CIWHLMKIAD AKAKSNVFKS MFGRMMKKAY PIGDLEEEWF AVVGKCGLRQ NKWVEKIFEM  420
RLLWAESLLR DTFFAGMRST QRCEQMNAFL KQYLKKNMRF YESVIIHELA LTHLRHTGAK  480
AVYETEDTIV VLAIALQKLE KHASEVYTRN VFFRVKKHLN RQGLYDCYER KETWNGCIFF  540
LKKYADDRTW TVELNRRTLS LKCSCKKMEW KGLPCAHMFR VMLMENMQSI PKSCILKRWT  600
CEAREEADNE VLEGRQEIYA ELVQTARFGT MTSICKEMCF FASHMDDGFA RVRDIVIKET  660
NNWRRAWVER GFDCGTNGRL AADSKESRLS QYYVKDPERT RAKGDRLCDG HNKRTCPHNL  720
LSYDACGISG SQAIHYSNPG SRTMGDSRFQ FGASSSGDFQ GVQHPFLSHS GMLNRVDRDG  780
SSSQKIDHSQ SHTMQSPWSE WNGTGSYTIV DRNSYSASFW KS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-92	FAR1 family protein