PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027123951.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 376aa MW: 42155.6 Da PI: 8.365 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.9 | 4.3e-09 | 204 | 251 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+ l+P + +k Ka +L + ++Y++sLq XP_027123951.1 204 SHSLAERVRREKISERMKILQALVPGC----DKVTGKALMLDEIINYVQSLQ 251 8*************************9....555*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 376 aa Download sequence |
MATFSYQHQQ QPLHLESSSG LFLQSSSQMR MSAGLLEEPN MTRMTTTTTS FPQFYRPDHF 60 LHQEIPSKSY VNESTCSIFD QSCTKVTHFS NNGPSLTNKT STDSSSVTDK LESGEQVTQK 120 VHAAAMDKKR KTKKGPLPVN SAQSKAIGDQ LAKGKKQRKC GRIMKEVEDK KSNEDKKVPE 180 KAAEEAPPTG YIHVRARRGQ ATDSHSLAER VRREKISERM KILQALVPGC DKVTGKALML 240 DEIINYVQSL QNQVEFLSMK LASLNPMFYD FGMDLDPYIA RPEPTLSNMA SPVQNMQQCD 300 PMQAPIISAT NNSLRTDTAN DYPQLDSSAS ALLIQQSHHI PQILSQENGQ LLWDVDDRRQ 360 KLINQTGFNN NLCSFH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 128 | 155 | KKRKTKKGPLPVNSAQSKAIGDQLAKGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50915.2 | 5e-59 | bHLH family protein |