PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027123407.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 369aa MW: 41749.6 Da PI: 6.782

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027123407.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	98.1	1.3e-30	15	153	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdk 90 +p G++F P+d el+++yL +kv+g +i+e+d+y+++P +Lp ++++e ++yfF++rd +y++++r+ r+tk +g W+ t k + XP_027123407.1 15 VPIGYKFVPSDYELLKYYLLPKVRGGFtlpAAGLGIIREADVYQSHPANLP-GLDKGEASCYFFTTRDLRYENSERTARTTKdgRGHWRMTSKRT 108 589*******************997654344468***********.6778899****************99955667**** PP NAM 91 evlskkgelvglkktLvfy.......kgrapkgektdWvmheyrl 128 +++++++++ g k+tLv++ ++k kt+W+mhe+ l XP_027123407.1 109 PLFEADRSNLGRKNTLVYHltkppgpGVPSNKDLKTNWIMHEFVL 153 ***************766655334566667*******87 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MIIPKKYLLE WIKFVPIGYK FVPSDYELLK YYLLPKVRGG FTLPAAGLGI IREADVYQSH 60 PANLPGLDKG EASCYFFTTR DLRYENSERT ARTTKDGRGH WRMTSKRTPL FEADRSNLGR 120 KNTLVYHLTK PPGPGVPSNK DLKTNWIMHE FVLDRSLYDC CQIPSASTNK LKQVVLCRIY 180 ERNKAEAEQE KSRTDQDSTS LRIRDAGDSS AGIERRETCT KRKQRPTSTP EKGTSSCNHH 240 KSVALFDQEG LPSGPPKRSR LVMVEQDESR MRCKEENGLE GNSRNDEEED VQSRIGCIED 300 NESGHLMASV NQEEEEEEFR ITTMNGGHIE EGNESSQELH PANAGTEENS TASGDCFNSI 360 NKLAKYTKA

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MIIPKKYLLE WIKFVPIGYK FVPSDYELLK YYLLPKVRGG FTLPAAGLGI IREADVYQSH  60
PANLPGLDKG EASCYFFTTR DLRYENSERT ARTTKDGRGH WRMTSKRTPL FEADRSNLGR  120
KNTLVYHLTK PPGPGVPSNK DLKTNWIMHE FVLDRSLYDC CQIPSASTNK LKQVVLCRIY  180
ERNKAEAEQE KSRTDQDSTS LRIRDAGDSS AGIERRETCT KRKQRPTSTP EKGTSSCNHH  240
KSVALFDQEG LPSGPPKRSR LVMVEQDESR MRCKEENGLE GNSRNDEEED VQSRIGCIED  300
NESGHLMASV NQEEEEEEFR ITTMNGGHIE EGNESSQELH PANAGTEENS TASGDCFNSI  360
NKLAKYTKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	7e-25	NAC family protein