PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027123150.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 455aa MW: 49309.5 Da PI: 7.3469 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 58.2 | 1.5e-18 | 154 | 203 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f++Lre++P++ ++K +Ka+ L +++eYI+ Lq XP_027123150.1 154 RSKHSATEQRRRSKINDRFQKLREIIPHS----DQKRDKASFLLEVIEYIQFLQ 203 889*************************9....9*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 455 aa Download sequence |
MMAQASSTNI NDENSNCSSY AGGGFTLWDE SAVKKGKTGK ENNAGDRAVL KEAEANVGAG 60 QWRASAERPS QSSSNHKLNA ATFSSLSTSK PSLAQRNQSF VNMITSAKSF QEEDDDDDDE 120 EEFVIKKEPS SHPKGNLSVK VDGKSTDQKP STPRSKHSAT EQRRRSKIND RFQKLREIIP 180 HSDQKRDKAS FLLEVIEYIQ FLQDKVQKYE GPYPGWNQEL SKPMPSRNLR GPEDFINSTQ 240 VTNIGSNPLI HAAKLNESKV TSSSALAING QHLESDVSSA AAFGEKDHQP DITDKAASVP 300 MALRHGIFPF GGTSTASVPL SSMPASDIDK TASHPQHQFW PRGSCTADSN ITDKLKDQEL 360 TIESGTISIS SIYSQGLLST LTQALQSSGI DLSQANISVQ IDLGKRANGR VNSSASVIKD 420 VDVPSCNQAM PRSIVTRAGE DSPGQALKRL KTSRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08130.3 | 9e-61 | bHLH family protein |