PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027123103.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB_related | ||||||||
Protein Properties | Length: 789aa MW: 87354 Da PI: 6.964 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.1 | 3.6e-07 | 55 | 97 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + a +q G++ +++I +++ + q++++++ + XP_027123103.1 55 AWTHQEEESFFSALRQVGKN-FEKITCRVQ-SKNKDQVRHYYYRL 97 6*****************99.*********.***********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 789 aa Download sequence |
MTLKMQMEPQ ISLDCNSCLH PENHVKEGIP GSTISLQDKN ASTLPVKRPT RQWAAWTHQE 60 EESFFSALRQ VGKNFEKITC RVQSKNKDQV RHYYYRLVRR MNKLLGPELC LDAKNSKDTN 120 AAMLRWWSLL EKYSCKASKL HLKPRRFKLF VETLETQLLK DRKKNVRKRA SQGENSSITA 180 PTGLPNQGKV SCHESRVVKD VLIDGQNIPK PGIGKGSSIH RHLNVGINRG NYKSGPSALK 240 TARYQRKAGA TSKAAYKRWE KAAIAGVSLV ADAAEHLERT ATDREVEHVE DAHVQNAFDY 300 CGKDMPSILN NMQSSMKLKL QLFPVDEATR RALEMDKHNP YLELTLSTRK KISSVLEHLN 360 RKWGQSSIAS GELMLLPYFV QQANQVSCPK WAKDSVLSAS DVYAQIGNPP VFRLRYGWFP 420 HADPGSATSL ASLSCPTQHH TETSIVNEQI VDTTPKSSPP TYQEAENLLG IHEGLLSAAK 480 MTTLTPSRLP NHTIGCAGIG PDVNTVKSSN HTAAHVLNRR ESTTDTVVVQ EENLDDLRPH 540 KTVALSAGEW ADSLTNISIG DLLTEASHNG EVNCIDSTEL RNSHCLQQIP FSCDSFDAAI 600 AAHIYKHQSR SALQPPLHTN TSSIWDGEET CDAFVFQKNS VFSEEFQNAS RISPPETSRE 660 IASTSSAASG KAQESDPEEP LPDDPMHGDI VDKCHADQHS FDDSQRDLNG LTDIYWPDSL 720 GALDLDISSC RYRSDDLILS DSLGGLNRLI ASSLDAFQSC SFFGSDKKES ASAVEAGEIA 780 SDLKISTQV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36960.3 | 0.0 | MYB_related family protein |