PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027122640.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family G2-like
Protein Properties Length: 226aa    MW: 25622.7 Da    PI: 8.2688
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027122640.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like84.51.1e-262680155
         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    kpr+rWt  LH++Fv+av++LGG+ +AtPk+i+  m+++ ++ +h+kSHLQkYRl
  XP_027122640.1 26 KPRIRWTAGLHNCFVKAVDRLGGPFEATPKEIMMQMDIPEVATSHIKSHLQKYRL 80
                    79****************************************************8 PP
2Myb_DNA-binding35.52.4e-113079348
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT..TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmg..kgRtlkqcksrwqkyl 48
                     rWT+ ++  +v+av +lGg+   t+k I+  m   +  t  ++ks++qky+
   XP_027122640.1 30 RWTAGLHNCFVKAVDRLGGPfeaTPKEIMMQMDipEVAT-SHIKSHLQKYR 79
                     9*********************************84445.5*********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MAAKGNDTKK LHTSDRQLQV AENTRKPRIR WTAGLHNCFV KAVDRLGGPF EATPKEIMMQ  60
MDIPEVATSH IKSHLQKYRL RMGCNIGTAA DSTVARKAAT NTMIEADDST SPAGWHTNEA  120
IQMMQAQRAK FEGNRKICKE EKNLDNVEQH QVQCTGDKNF HTSTGHQRGK GKKRAEDEDV  180
FHLERQNGQE KQSDHHHQRP LFNLNAPALD EHEPGRDCEI SFHQPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13640.21e-19G2-like family protein