PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027122229.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NAC | ||||||||
Protein Properties | Length: 166aa MW: 19720.8 Da PI: 6.3923 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 71.3 | 2.5e-22 | 12 | 126 | 1 | 109 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkd 89 +p+G+rF Ptdeelv++yL++kv k+l+++ + i+ d+y+ +P+ L + +++ +e+ew fF+ +d+ ++r++r++ g+W+ g++ XP_027122229.1 12 MPVGYRFVPTDEELVKYYLANKVLYKPLPVKIIreIDAHDLYSKHPKCLVgNgTFNDNEREWLFFIYKDEYFLGKTRSTRMVGngIGFWRFIGEE 106 699************************8874433477778*********74347778899**********99999*****87633678******* PP NAM 90 kevlskkgelvglkktLvfy 109 +++++++g k L+++ XP_027122229.1 107 EPIHNSEGDIFAFKIYLTYF 126 *****999999999999987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
METSQHLLEL EMPVGYRFVP TDEELVKYYL ANKVLYKPLP VKIIREIDAH DLYSKHPKCL 60 VGNGTFNDNE REWLFFIYKD EYFLGKTRST RMVGNGIGFW RFIGEEEPIH NSEGDIFAFK 120 IYLTYFFSFL FNLCPTHFPA DSKLGVFRLI HCHLTYILRM EFETLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62380.1 | 2e-20 | NAC family protein |