PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027122156.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 174aa MW: 19749.2 Da PI: 10.3998 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.2 | 8.2e-10 | 16 | 64 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + Er+RR r++s++ eL +l+P+++++++++ls + L +++ YI +L XP_027122156.1 16 KTTERNRRIRMKSSILELISLVPQQFNPSKERLSPKDQLHRVTAYITQL 64 568*********************99999999***************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MESYNASDAT TKLDRKTTER NRRIRMKSSI LELISLVPQQ FNPSKERLSP KDQLHRVTAY 60 ITQLRERVEK LKKMKEMLIN KFNTSGIPGS GIPVVKITEI GSNLEVVLVT GLSKKFGLHE 120 VILVLHGQGV EVVSISISTM ADRIYHILHA QVKMPRIGVD TLIIYDRLQK LCLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 6e-21 | bHLH family protein |