PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027122114.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | C2H2 | ||||||||
Protein Properties | Length: 192aa MW: 21791.9 Da PI: 9.1002 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.8 | 0.00034 | 81 | 100 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ykC+ C+k F+++ + H+ XP_027122114.1 81 YKCEFCSKKFTNSQAFGGHQ 100 9***********99887777 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MGQNSAISFL LSPARSCVDY FSCDTPVDNK RLKLFGFEID SCQKSTTAPR SERDESVVHS 60 RTDELPKAAG NPLCSIELQK YKCEFCSKKF TNSQAFGGHQ NAYRKERLMK KAYSFKPKGQ 120 ALMPKFYLFL TSDAVIYHYS PRDLGDLPFC LSVCIVGKSQ IYSFASLNQH QNFDGLHFSH 180 SKALSRHCKF QL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05120.1 | 1e-09 | C2H2 family protein |