PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027119781.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family G2-like
Protein Properties Length: 369aa    MW: 39717.3 Da    PI: 7.82
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027119781.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like32.61.7e-101233355
         G2-like 33 lelmkvkgLtlehvkSHLQkYRl 55
                    +++m+vkgLtl+h+kSHLQk+Rl
  XP_027119781.1  1 MRVMGVKGLTLYHLKSHLQKFRL 23
                    789*******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MRVMGVKGLT LYHLKSHLQK FRLGKQPHKE FSDHPIKDGE RASTLELQRS SSASSSGMIG  60
RSMNEMQMEV QRRLHEQLEV QRHLQLRIEA QGKYMQTILE KACQTLAGEN MASAAAAGSY  120
NKGGNQAGGG VVDIKEFGPP LSFPSLQDLN IYGSGEQLEL QQGGMVVDRS PSLDGFMSNN  180
NDTQLCHLGK KRPTPPSPYG GGSGKSPASL MWSDHHHHHH HDLRLQELGS AAASCLGNSQ  240
DHHHHHDPFK GDHHHQIQMN NAPGGAGVLS LERSNVDVVI DSMSDSTCSN MYETKPLISG  300
SCGSDGGMVL GGTDQKNASS KLERPSPRRA STTATTPPPS SSSDHRMNPV QIGTGAAGAM  360
SQARNSPFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79430.13e-55G2-like family protein