PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027119768.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 365aa MW: 41613.8 Da PI: 7.2464

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027119768.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.9	9.3e-54	10	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeel+++yL+kkv+ + ++l +vi+evd++k+ePwdL++ ++ + ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++ XP_027119768.1 10 VPPGFRFHPTDEELLHYYLRKKVSYEAIDL-DVIREVDLNKLEPWDLKEkcRIGSgPQNEWYFFSHKDKKYPTGTRTNRATSAGFWKATGRDKAI 103 69**************************.9***********952444443456******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++ +g++ktLvfy grap+g+ktdW+mheyrl XP_027119768.1 104 HLGNSKRIGMRKTLVFYIGRAPHGQKTDWIMHEYRL 139 ********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MPAATGQFSV PPGFRFHPTD EELLHYYLRK KVSYEAIDLD VIREVDLNKL EPWDLKEKCR 60 IGSGPQNEWY FFSHKDKKYP TGTRTNRATS AGFWKATGRD KAIHLGNSKR IGMRKTLVFY 120 IGRAPHGQKT DWIMHEYRLD DENAEIQEDG WVVCRVFKKK SNTNRGFQPD HELDLRDHEE 180 HEHLTPHMKL AGVSTSSMME PTTRQNSQPL CDYSLVDCSM HLPQLLSPDV AESMSTVVRH 240 HYHHPHHHPP SFLPVPSLNA VVEDLDCNSQ NLLSLTSGSG GCGGGLLQYN EEKFSSDWTF 300 LDKLLASHQS FDQQSKCYSF MSQPATAAHH HHHHVVPSSA QKLPLPIIPF HHVGSGPEFV 360 KFSHK

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MPAATGQFSV PPGFRFHPTD EELLHYYLRK KVSYEAIDLD VIREVDLNKL EPWDLKEKCR  60
IGSGPQNEWY FFSHKDKKYP TGTRTNRATS AGFWKATGRD KAIHLGNSKR IGMRKTLVFY  120
IGRAPHGQKT DWIMHEYRLD DENAEIQEDG WVVCRVFKKK SNTNRGFQPD HELDLRDHEE  180
HEHLTPHMKL AGVSTSSMME PTTRQNSQPL CDYSLVDCSM HLPQLLSPDV AESMSTVVRH  240
HYHHPHHHPP SFLPVPSLNA VVEDLDCNSQ NLLSLTSGSG GCGGGLLQYN EEKFSSDWTF  300
LDKLLASHQS FDQQSKCYSF MSQPATAAHH HHHHVVPSSA QKLPLPIIPF HHVGSGPEFV  360
KFSHK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79580.1	1e-108	NAC family protein