PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027118229.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB | ||||||||
Protein Properties | Length: 264aa MW: 30945.8 Da PI: 9.8171 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 62 | 1.3e-19 | 22 | 69 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++vk++G g+W+++ar g++R +k+c++rw +yl XP_027118229.1 22 KGPWTAEEDRLLIEYVKLHGEGRWNSVARLAGLKRNGKSCRLRWVNYL 69 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.1 | 3.1e-16 | 75 | 119 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E++ ++++++++G++ W+tIar ++ gRt++++k++w+++ XP_027118229.1 75 RGQITPHEEKVILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 119 7888******************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence |
MSWEVMAAEQ LAWGVMEEGW RKGPWTAEED RLLIEYVKLH GEGRWNSVAR LAGLKRNGKS 60 CRLRWVNYLR PDLKRGQITP HEEKVILELH ARWGNRWSTI ARSLPGRTDN EIKNYWRTHF 120 KKKAKVSSDN SEKSKARLLR RQQFQQQQLL QQQQQQQQQT QVFDMRRLMS LLDENENRVP 180 TLPQMKQDAS AAATPIFPNT IDDHHQVFLY SVFNNSAALP EATNHDQDIN WDGLWNMDEF 240 SGNIYYSNSA NRATLRTSAA TPYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24310.1 | 3e-80 | MYB family protein |