PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027118154.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 337aa    MW: 37153.5 Da    PI: 4.9306
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027118154.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2569.7e-185098355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + GVr+++ +gr++AeIrdp++   + r++lg+f+ta+eAa a+++a+++++g
  XP_027118154.1 50 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 98
                    56******.**********965...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MSTSKTPEKP FNLYEPILTQ TGFTLLQRNT SVSQPSEKRG RRKQAEPGRF LGVRRRPWGR  60
YAAEIRDPTT KERHWLGTFD TAQEAALAYD RAALSMKGTQ ARTNFVYSDN TNFHSLISPF  120
DLQSILPPSH SLTKNQNKQH DATKHPSSSS QAREHPISSD NDACSQSSYG SSPSENFFFS  180
SGSETNSGYL DCIVPDNCLK PPSHHKEYSN NSNADQTSVD QSNYSNLRVL ENQSHSDADV  240
TNVLPVDSTN PGNFSCYEGL NFGFLENEQS WEMNSCELSA VINNPLMGET GCMEGYDPTV  300
DNTSLESMAA ATSSAGFSSV FPPFAFGDVV DSGYPPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.11e-64ERF family protein